Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq117378 217 3e-51 seq51865 172 1e-37 seq8712 163 5e-35 seq97857 114 2e-20 seq58811 93.3 8e-14 >seq117378 Length=621 Score = 217 bits (240), Expect = 3e-51 Identities = 437/636 (69%), Gaps = 29/636 (5%) Strand=Plus/Plus Query 212945 CTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGT 213004 |||||||| ||| || ||||||||||||| || ||||||||| ||||||||||||| ||| Sbjct 6 CTGGTAAATGTTGGATGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGTG-AGT 64 Query 213005 GCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAG 213064 ||| ||||||||||| || | ||| | | ||| | | |||||||| | ||| Sbjct 65 CGAGGCAGTGGGCATGGG-GCGAGCAGCAAAGAGTTGCGAATGCCGTGCTCCCTGAT--- 120 Query 213065 GCGCCGAAGCTCTGCCCAGT--CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCAC 213122 | ||| ||||| ||| |||| || ||| | | || ||| || |||||| Sbjct 121 -CTCCG---CTCTGAG-AGTATCCCA-CTCCCACAAA--TCGGAAGGCTTAACATTCCAC 172 Query 213123 ATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCA 213182 ||||| ||||| | || || | | |||| ||||| | | | |||||| || || Sbjct 173 ATGTCGAACTGGAGAATACCCTCGGAGGCGGGAGAGCCCTTGAAGGTGGAGTAAGGTCCC 232 Query 213183 TGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATC 213242 ||||||||||||| |||| || || ||| ||||||| ||||||||| ||||| || Sbjct 233 TGCTCCTTGGCCAACTCGACAGAGGCAGTCAGAGCAGCGTGGTAGATGGTCTCAAAGATT 292 Query 213243 TCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACA 213302 | | ||||||||| || || || ||| ||| ||||| || ||||| || Sbjct 293 TGCTTGTTGAGCTCACGAGCTTCGGGAGACTCGAACGGCATGCGCAGAGCCAGGAACGCA 352 Query 213303 TCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCA 213361 || || || |||||||| || | ||||| |||| ||||| || |||| ||| |||| Sbjct 353 TCGGCAAGACCCTGGACACCAACACCGATAGGTCGGTGTCGCATGTTACTGTTGCGAGC- 411 Query 213362 CTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTT 213421 ||||| | ||||| |||| || ||||||||||| | ||||||| |||| | Sbjct 412 CTCCTGAACAGGGTAGTGGTTGACATCAATGATCTTGTTCAAGTTGCGGACAACCACCTG 471 Query 213422 GGTGACATGGGCCAGGTACTCGTGATTGAACACGTA---GCCCCCGTC---CTGCACAAA 213475 || || | | || | | ||||| | || |||| |||| | ||| | Sbjct 472 AGTAACCTCGTGGAGTTTC------TTGAAGTCATATCGGCCCTCGTCGTAGTCCACGTA 525 Query 213476 CTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTC 213535 | |||||||| | | |||| |||||||||||||||||| | || | | ||| || Sbjct 526 GGCGGGCAGGGCAAGGGAAGCCAAGTTGCAAACGGCCACCTCATCAGGGGCACAGTATTC 585 Query 213536 CATGATCTCGGTGCACAGGTTGCTGCATCGGATGGT 213571 || ||||| ||||| |||||| || || ||||| Sbjct 586 GATAATCTCAGTGCAAAGGTTGGAGCTGCGAATGGT 621 >seq51865 Length=821 Score = 172 bits (190), Expect = 1e-37 Identities = 330/472 (70%), Gaps = 16/472 (3%) Strand=Plus/Minus Query 47887 CGAGATGTTCTCCATGAAGAGGAAGGGGTTGG--GTGTGTTA-TACACCCGTGTCAGGCC 47943 ||||||||||||||| ||| || ||||||| | ||| || ||| | ||||| ||| Sbjct 816 CGAGATGTTCTCCATAAAGTCAAAAGGGTTGGTGGCGTGGTAGTAC-CTCGTGTT--GCC 760 Query 47944 CATCTGTTCCAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTT 48003 | |||||| | || ||||| |||| ||||| | ||||||||||| ||| Sbjct 759 GAGGGAGAGCAGCAGCCGGTCGGCGACAAACTCAATGTACTGGCACATGAGGGTGGCGTT 700 Query 48004 CATGCCTATGAGGGACACG-GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGG 48062 |||||| | || | ||| |||| || | | || ||||||||||| |||| |||| Sbjct 699 CATGCCGAGCAGCG-CACAAGGCAGGGCGTCGGACAGGAACTCCTTCTCGATCTCGACGG 641 Query 48063 CTTCCCCCACAATCTGCTTAACGCGG-GACTCTG-AGGGTTTGTTGCGCAGGTGCTTGGC 48120 | || | || |||| | ||| | || || |||| |||| ||| || | Sbjct 640 CCTCGGTGATGATG-GCTTG-CACGGCGTCTTTGGAGGGGCGGTTGTTGAGGAGCGAGA- 584 Query 48121 ATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGA 48180 |||||| |||||||||||| |||||| ||||||||| || ||||||| ||||||| Sbjct 583 --AGAGCAGGCAGGCAAAGTCGGTGTGCATGCCTTCGTCACGCGAGATGAGCTCGTTGGA 526 Query 48181 GAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCC 48240 ||| ||| || ||||||| || | || ||||||||||| || | ||||||||||| Sbjct 525 AAAGGTGAGGCCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCC 466 Query 48241 AGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTT 48300 | ||||||||| || ||||| || |||||||| || | | | || | | ||| Sbjct 465 ACTGAAGAAGATTCCTTCCACCGCAGCGAACGCTACCAGACGGTTGGCAAAGGTGGAGTT 406 Query 48301 CTTGT-CTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 |||| | |||||||| || |||||||| ||||| || |||||| || Sbjct 405 TTTGTCCGGAGATCCACCGCAGGGCCCAGTCAGCCTTTTTGCGGATGCAGGG 354 >seq8712 Length=1748 Score = 163 bits (180), Expect = 5e-35 Identities = 418/631 (66%), Gaps = 13/631 (2%) Strand=Plus/Plus Query 213779 GGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGAC 213838 ||| |||||||| ||||||| |||| | | || | || |||||||| || || | Sbjct 133 GGGGCACATGAGAGTCCAGTCGCCGTTCTTTTCAACACGCTTCATGAACAAATCGGGAAT 192 Query 213839 CCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAG 213898 ||| || || ||| ||||| | || | || ||| || ||| || ||||| Sbjct 193 CCATAGAGCAAGGAAGAGGTCACGGGCACGAACTTCCTCCTTGCCGTGGTTCTTTCGCAG 252 Query 213899 ATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG- 213957 || || || ||||| | ||| |||||||||||||||| ||| |||| || || || | Sbjct 253 GTCGAGGAACTCAAACACGTCTGCGTGCCACGGCTCCAGGTAAATGGGCAAAGCACCAGG 312 Query 213958 --GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGG 214015 || | ||||| |||||||| || ||||| ||||||| | ||| || | ||| Sbjct 313 TCGCTTGTTGCCACCCTGGTCGACGTATCTGGCGGTGTTGTTGAACACGCGAAGCATGGG 372 Query 214016 TACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTT 214075 || | ||||| || |||||||| || || || |||||||| | ||| | | | Sbjct 373 AACGACGCCGTTTGAGGTGCCGTTGGTGCCGGCAATGTACGAGCCAGTGGCACGAATGCG 432 Query 214076 GCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGT 214135 | | | || || ||||| || || |||||||||||||||||| || || | || Sbjct 433 GTGGACGTTCAGGCCGATGCCGCCAGCCATCTTGGAGATCATGGCGCA-CGTCTGAGGGT 491 Query 214136 CTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAA-GAAGCAGCTCGAGAGCT 214194 || |||||| | ||||||||||| | || || ||| ||||||| || |||| Sbjct 492 GTCATAGATGCCTTCGATGCTGTCATCCTTCAG--TCGACAAGGAAGCAGGATGACAGCT 549 Query 214195 GGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAG 214254 || | || |||| |||||| || ||||| ||| ||| | | || ||| | | Sbjct 550 GGCATTGTGGCGTACCAGCGTTGAATAGTGTGGGCGAGGCGTGGGTGAAGAATTTGCTCG 609 Query 214255 AGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGC 214314 | | ||| ||||||| |||||||| | || || ||| | || Sbjct 610 ACATGAGGTTGTAGGTTTCCAGGACACGCTCCAGGTTGTCTCCCCAGATACCGACGGCAA 669 Query 214315 ACCTCATCAGCATGTGCTGGGGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGT 214371 | ||| | ||||||||| || | || | || || ||| | |||||| || | Sbjct 670 CACGCATAATCATGTGCTGTGGTCGCTCGACAATCTTGCCGTTGAG---CTTGAGGAGAT 726 Query 214372 AGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 |||| ||||||||||||||||| |||||||| Sbjct 727 AGGATCGCTCCAGAGTCTTGAAGCCAAAGTA 757 >seq97857 Length=911 Score = 114 bits (126), Expect = 2e-20 Identities = 378/580 (65%), Gaps = 17/580 (3%) Strand=Plus/Plus Query 213494 GGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAG 213553 ||||| ||| || || || ||||| | | | | |||||||| | ||||| ||||| | Sbjct 318 GGCCAAGTTACAGACAGCAACCTCATCTGGGGCGGTGTACTCAACAATCTCAGTGCATAA 377 Query 213554 GTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCA-GAATCCT 213612 ||| | ||||| ||||| || |||| ||||| ||||||| | ||| | |||| Sbjct 378 GTTCGAACTGCGGATAGTGCCGAGATTCTTCTGGTTG--CTTTGCGGTTGCAAGCGTCCT 435 Query 213613 TGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGT 213672 |||| |||||| |||| || ||||| || | | | || || ||| ||| | Sbjct 436 TGTAAAGCATGAAGGGATTACCAGTCTCAGTTTGAGCCTCGAGGAT--GGCATACGAGCT 493 Query 213673 ACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCT 213732 | ||| | || | | | ||| || | | | ||| || ||||||||| Sbjct 494 TC-TGGGCGCGAACGGTCTCACGAC--CTTTGTTCTTTTTCTCATAACTTTCGTAGAGGG 550 Query 213733 CGTTGAATTCGTGGCCCCAGACCCTGTCC---AGTCCCGGACAGGATGCGGGACACATGA 213789 | | || || | || |||| |||| || || ||||| ||||||||| | Sbjct 551 CCTCAAACTCATCACCGTAGAC---GTCCGCGAGACCAGGACACTCGTTGGGACACATCA 607 Query 213790 GGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGG 213849 | |||| ||||| | ||| ||| | || |||||| || ||||||| |||||| ||| Sbjct 608 GAGTCCACTCCCCATTCTCTTGGACACGCTTCATGAAGAGATCCGGGATCCACAGGGCGT 667 Query 213850 TGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGT 213909 ||| | ||| | | | || || ||| ||| || || || || | ||| Sbjct 668 AGAATAAGTCGCGAGCGCGAACTTCCTCTTTGCCATGGTTCTTACGAAGGTCCAAGAAGC 727 Query 213910 CAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---C 213966 |||| || || |||||||| ||||| | |||||| || || || || || | |||| | Sbjct 728 CAAATATATCGGCGTGCCATGGCTCGAGGTAGATTGCGAATGCTCCGGGACGCTTGTTAC 787 Query 213967 CGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGT 214026 | ||||| || || | |||| ||||| ||| ||| | | ||| | ||||||| Sbjct 788 CACCCTGATCGACGTAACGGGCCGTGTTGTTGTAGACGCGTAACATGGGGATGAGCCCGT 847 Query 214027 TGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGC 214066 ||||| |||||| || || | || || ||||||| ||| Sbjct 848 TGGACGTTCCGTTAGTGCCTCCGATGTAGGAGCCGGTGGC 887 >seq58811 Length=295 Score = 93.3 bits (102), Expect = 8e-14 Identities = 169/243 (70%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 213173 GTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGT 213232 ||| ||||| | |||||| ||| |||| |||||| || |||| || ||||||| || Sbjct 240 GTACGGGCCGTACTCCTTCGCCTGCTCCATCGACGCCGTCATGGCACCGAAGTAGATCGT 181 Query 213233 TTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCG 213292 || || || ||| || ||| || || ||| ||| |||||| || || Sbjct 180 CTCGAAAATATCCTCATTTAGCCGGCGCGCTTCGTCCGACTCGAACGGCATCCGCA-GCA 122 Query 213293 TTG-GAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAG 213351 | |||| |||| ||||||||||| || || | |||||||| | ||| | || ||| Sbjct 121 TGATGAACGCATCGGCCAGCCCCTGCACACCCAGACCGATGGGCCGGTGGCGCATGTTG- 63 Query 213352 ACTTGGA--GCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCG 213409 || || | ||||| | || ||| ||||| |||||| ||||||||||||||||| Sbjct 62 -CTCCGACGGGCTTCCTCGACCGGATAATAGTTGATGTCGATAATCTTGTTGAGGTTGCG 4 Query 213410 GGT 213412 ||| Sbjct 3 GGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930015565952000