Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_019514.1 Length=74669 Score E Sequences producing significant alignments: (Bits) Value seq43107 131 8e-26 seq40687 82.4 4e-11 >seq43107 Length=2614 Score = 131 bits (144), Expect = 8e-26 Identities = 112/137 (82%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 16117 AATGAGAAAGCCGACGCTGGTGCTGTCCGTATGGACGGTATCGAAAAGCAGGCCGGTGTG 16176 ||||| ||||| ||||| ||||| || || ||||||||||||||| | ||||| | | | Sbjct 855 AATGA-AAAGCGGACGCAGGTGCCGTGCGCATGGACGGTATCGAACATCAGGCAGCAGCG 913 Query 16177 CTGGATGGGCGTGTCGGTGCAACCGAAGTCCGTGCTGACAAGCTGGAAGAAAGCCAGCGT 16236 |||||||| || ||||| || || || || ||||| || |||||||||||| |||||||| Sbjct 914 CTGGATGGCCGCGTCGGGGCGACAGAGGTGCGTGCGGATAAGCTGGAAGAAGGCCAGCGT 973 Query 16237 GAGCAGGATAAGCAGAT 16253 |||||||||| || || Sbjct 974 CAGCAGGATAAACAAAT 990 >seq40687 Length=4650 Score = 82.4 bits (90), Expect = 4e-11 Identities = 152/218 (70%), Gaps = 5/218 (2%) Strand=Plus/Plus Query 17059 TGCTGCTGTGCTGCTGCCTCGCAGTGGCCTTGGGCATAAATCTGGCATTGTACTTGGGAA 17118 ||| || ||| | || || ||| |||||| || || ||| ||| ||||| || || || Sbjct 2416 TGCCGCCGTGATTCTTCCGCGCTCTGGCCTGGGCCACAAACATGGTATTGTCCTGGGTAA 2475 Query 17119 CCTGGTGGGTCTGATTGATTCGGACTATCAGGGTGAGCTGAAGGTTTCCCTGTGGAACCG 17178 ||||| |||||||||||| | ||||||||||| | || | ||| || | ||||| || Sbjct 2476 TCTGGTTGGTCTGATTGATGCCGACTATCAGGGACAACTTATGGTATCGGTATGGAATCG 2535 Query 17179 CAGCGCTGAA--CCATACACTGTCAGCCCTGGTGAGCGTGTTGCCCAAATGGTTATCGTG 17236 | | ||| | ||| || |||| || || || || | ||||| ||||| | || Sbjct 2536 CGGGCAGGAAAGCTTTACGCT-TCAG-CCGGGCGATCGCATGGCCCAGCTGGTT-TTGTC 2592 Query 17237 CCAGTAGTGCAGGCACAGTTTGAGCTGGTTGATGAATT 17274 || || || ||||| | || | ||||| || || || Sbjct 2593 CCTGTCGTCCAGGCCGAATTCAATCTGGTAGACGAGTT 2630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238436752729000