Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_019543.1 Length=160646 Score E Sequences producing significant alignments: (Bits) Value seq33499 161 1e-34 >seq33499 Length=26748 Score = 161 bits (178), Expect = 1e-34 Identities = 269/384 (70%), Gaps = 6/384 (2%) Strand=Plus/Minus Query 50381 CCGTCGTAACCAGCACCGACCACAGTCTGCGGGACTCCACCTTGGTATTTGTTGGCACGA 50440 || ||||| || |||| | || || || || || |||||||||||||| | ||||| Sbjct 24069 CCTTCGTAGTCACCACCAATAACTGTTTGTGGTACACCACCTTGGTATTTCTCAGCACGT 24010 Query 50441 ATCATTTCGACTTCCAACTGGCGCCATTTGATCATTTCAGGAGTAATGGTTTTCTGCAGC 50500 ||||||| ||||| | || ||| ||||| || ||||| || |||||||||| | Sbjct 24009 TTCATTTCAACTTCGAGTTGTTTCCAACGAATCATCTCTGGAGTGATTGTTTTCTGCAAC 23950 Query 50501 AGGGCGTTAGCTTCAGCTTCTTTACCAGCGGCATACAGTTTAGCATCAGCATCACGCTCG 50560 | |||||||||||||||||| ||| ||||| | ||||||||| ||||| || ||| Sbjct 23949 ACACTGTTAGCTTCAGCTTCTTTTTGAGCAGCATATAATTTAGCATCTGCATCTCGTTCG 23890 Query 50561 TTAGCAACCGCGTTTTGTTCACGAGCTTCACGTGCAGCTTCGGCGGTCTTAACTTGTTGC 50620 || || || | | | ||| ||||| || |||| || || |||||||| |||| Sbjct 23889 TTTGCCTGGGCTTCATTATTACGGGCTTCTCGATCAGCCTCTGCCTTCTTAACTGCTTGC 23830 Query 50621 TGGGCTACTTTTTCAGCCTTGTCCAGGTCCGCTTGAGCTTGGTTTACAGCTTCTTCGCGA 50680 || | | |||| | | |||||| || || || ||| ||| || |||||| ||| Sbjct 23829 TGTGTTTCTTTAGCTACTCGGTCCAGATCAGCCTGTGCTGCGTTAACCTGTTCTTCACGA 23770 Query 50681 ATCTTGG--TTTGCTCAACCTG-GTCTTGAATCAGCTTCGGCAGAGTAATCTCTTGCAGG 50737 ||||| | |||| | ||||| || || || | | |||| || || ||||||| | Sbjct 23769 ATCTTTGTATTTGTT--ACCTGCTTCATG-ATTACATCAGGCAAGGTGATATCTTGCAAG 23713 Query 50738 AATACTTCGGTTACTTCATAACCA 50761 || | ||| |||| ||||||| Sbjct 23712 AAGATTTCTTTTACAGTATAACCA 23689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513102121528000