Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_019719.1 Length=41528 Score E Sequences producing significant alignments: (Bits) Value seq84058 416 8e-112 seq93587 370 3e-98 seq70443 280 4e-71 seq49821 242 1e-59 seq56092 163 8e-36 seq57448 158 3e-34 seq55112 150 5e-32 seq72432 149 2e-31 seq38457 145 2e-30 seq53795 143 7e-30 seq28323 138 3e-28 seq56093 136 1e-27 seq34527 136 1e-27 seq53794 102 2e-17 seq56549 100 8e-17 seq83242 98.7 3e-16 seq52587 82.4 2e-11 >seq84058 Length=491 Score = 416 bits (460), Expect = 8e-112 Identities = 391/493 (79%), Gaps = 4/493 (1%) Strand=Plus/Minus Query 4698 TGCTGAACGGCGACGGTACCGGGGAT-AACCTGGAAGGGCTGAACAAAGTGGCAACCGCC 4756 |||||||||| ||||| | || || ||||| ||||| || ||| ||||| || | Sbjct 490 TGCTGAACGGAGACGGCAAAGGCGACGAACCTTGAAGGTCT-AACGCGGTGGCCACACCG 432 Query 4757 TATGACACCTCGCTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCACGCTATT 4816 |||||| | || ||||||||| |||| || || || |||||||| || ||||| || || Sbjct 431 TATGACGCTTCTCTGAATGCCTCCGGGGATACGCGTGCTGACATCATTGCTCATGCGATC 372 Query 4817 TATCAGGTGACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAACCCGCGCGACTGG 4876 || ||||| || |||||||| |||||||| |||||||| |||| || || ||||||||| Sbjct 371 TACCAGGTCACTGAGTCTGAATTCAGCGCGTCCGGTATTATCCTTAATCCTCGCGACTGG 312 Query 4877 CACAACATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCA 4936 |||| |||||| |||| |||||| ||| || || |||||||| || ||||| ||||| Sbjct 311 CACAGCATCGCACTGCTTAAAGACCGTGATGGTCGTTATATCTTTGGCGGTCCGCAGGCG 252 Query 4937 TTCACCAGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGC 4996 |||||||| |||| |||||||||| |||| || || || || | |||||| |||| Sbjct 251 TTCACCAGCAACAACATGTGGGGCCTGCCTGTTGTGCCTACGCGTTCACAGGCCAGCGGC 192 Query 4997 ACCTTTACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGCATGGATGCCACC 5056 || ||||| || || ||||| || |||||||| ||||||||||| ||||||||||| || Sbjct 191 ACATTTACTGTTGGTGGTTTTGACATGGCCTCTCAGGTCTGGGACCGCATGGATGCAACG 132 Query 5057 GTGGAAGTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTGACCATCCTGTGC 5116 || || || ||||| |||||||| || ||||| || ||||| |||||||| |||||||| Sbjct 131 GTTGAGGTCAGCCGCGAAGACCGGGACAACTTTGTCAAAAA-ATGCTGACAATCCTGTGT 73 Query 5117 GAAGAGCGTCTGGCGCTGGCGCATTATCGCCCGACAGCAATCATCAAGGGCACCTTCTCT 5176 || |||||||| || ||||| || |||||||| |||||||||||||| ||| | || || Sbjct 72 GAGGAGCGTCTTGCTCTGGCTCACTATCGCCCTACAGCAATCATCAA-GGCTCTTTTGCT 14 Query 5177 TCTGGCTCATGAT 5189 || ||||| |||| Sbjct 13 TCAGGCTCCTGAT 1 >seq93587 Length=445 Score = 370 bits (410), Expect = 3e-98 Identities = 341/430 (79%), Gaps = 1/430 (0%) Strand=Plus/Minus Query 1883 GTGAATGCGGTGGTGGTGAAAGATGCTGCTGGCAACCGCAAGCTCGATAAATCCAAAGCA 1942 || ||||| ||| | || ||||| || || |||||| | ||||| || |||||||||||| Sbjct 445 GTTAATGCCGTGATCGTCAAAGACGCAGCGGGCAACAGAAAGCTGGACAAATCCAAAGCA 386 Query 1943 ACGGGCCGTATTGATGGCATGGTCGCAATGACAATGTCCGTTGGTGCTGCTAATGGGGAA 2002 || ||||| ||||| || |||||||||||||| ||||| |||| || ||||| ||||| Sbjct 385 ACAGGCCGCATTGACGGTATGGTCGCAATGACCATGTCTATTGGCGCGGCTAACGGGGAG 326 Query 2003 GTTACCGAACAGGGTGGTGACTTCGACGACTTCATTTTCCGACCGCTGAGCATGTGATGG 2062 || || |||||||||||||| || |||||||||||| |||||||||||||||||||| Sbjct 325 GTCACTTTGCAGGGTGGTGACTTTGAAGACTTCATTTTCAGACCGCTGAGCATGTGATGG 266 Query 2063 AAGAACCTAAATACACGATTGACCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGCAGT 2122 ||||||| |||| || ||||| || || ||||||||||| |||||||| ||| |||| Sbjct 265 AAGAACC-GAATATACAATTGATCTACGGACCAATAACGGTCTGTGGGCAAAGCTTCAGT 207 Query 2123 CCTGGTTTGTCGGCGGGCGTTTAGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTT 2182 | ||||| ||||||||||| ||||| || || ||||||||||| ||| | || || || | Sbjct 206 CATGGTTCGTCGGCGGGCGCTTAGTTACGCCTAATCAGGGCTCGCAGTCCGGTCCGGTGT 147 Query 2183 CGGCCCACGGACACCTGGGCGATTCATCCATTAACGATGAACGGATACTGCAAATTTCGA 2242 | || ||| ||||| ||||| || | | ||||| ||||| || | || || |||| Sbjct 146 CTGCATCCGGGCACCTTGGCGACTCCGCAGTCAACGACGAACGAATTTTACAGATATCGA 87 Query 2243 CTGTGTGGCGCTGCGTGAGCCTGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCT 2302 | || ||||| || ||||| |||||||||||||| || |||| | || |||||||| | Sbjct 86 CGGTCTGGCGTTGTGTGAGTCTGATTTCAACGCTGACATCATGTCTGCCACTTGATGTGT 27 Query 2303 TCGAAACAGA 2312 |||| || || Sbjct 26 TCGAGACGGA 17 >seq70443 Length=468 Score = 280 bits (310), Expect = 4e-71 Identities = 316/421 (75%), Gaps = 4/421 (1%) Strand=Plus/Plus Query 27306 GCTATTTCATGGTCAGACTCAATTTGCTTTGCGAGAGCTTCAGCTGC--TGCCTTAGCTT 27363 || |||||||| || || || |||||| || || ||||| || ||| |||| Sbjct 1 GCAATTTCATGATCTGATTCGATTTGCGCCGCCAGCTTCTCAGCAGCAATGCGC--GCTT 58 Query 27364 CTTCTTCGGCTTTAATCCGCGCCTGTTCTTCCTCATAATCAGTAAGAGGCTGGCGCGCCT 27423 | ||||| || || || || |||| || |||| | || || | ||||| || |||| Sbjct 59 CCTCTTCAGCCTTGATGCGTTCCTGCTCCGCCTCCCAGTCCGTTACTGGCTGACGGGCCT 118 Query 27424 TGGCTTTCAGTTCATCAAGGCGATCGCGCACTGTCTTGCGGTTGGCATCAATTAGCTTTG 27483 | | ||| |||| || || || || ||||||||||||||||| || |||||||| | Sbjct 119 TATCGCGCAGCACATCCAGTCGGTCACGTACTGTCTTGCGGTTGGCGTCGATTAGCTTCG 178 Query 27484 GAATTTCCTTCAGTTCAGCAACAAGGTCTTTGCCAAGACCATCGAGATATGTTTTCGTCT 27543 | | || |||||||| ||||| | || || || | |||||| || || | |||||||| Sbjct 179 GCACCTCTTTCAGTTCGGCAACCAAATCCTTACCCAAACCATCCAGGTAAGATTTCGTCT 238 Query 27544 GCGCAACTTTATACGCCAGAGAAGCGATCTCCTTTCTGCCCTTTGCCGTTGTGATATCAG 27603 | | || || ||||| ||||||||||||||||||||||| ||||| |||| ||| | Sbjct 239 GTGATACACGGTAGGCCAGTGAAGCGATCTCCTTTCTGCCCTTCGCCGTGGTGACATCCG 298 Query 27604 GCACAAAGGACATAACTTCACGTTCAACCTTTTGAAGGATTTCTTCAATCTGGTCGGCAG 27663 |||||||||||||||||||||| || ||||| ||||| ||||||||||||||||| |||| Sbjct 299 GCACAAAGGACATAACTTCACGCTCGACCTTCTGAAGAATTTCTTCAATCTGGTCAGCAG 358 Query 27664 ACTGAAATACAGTCATTGCATTTGATTTTTCAATAACAACTAAATCTGTTACTTCACTCA 27723 ||| ||| || || | ||||| | || ||||| || || ||||| ||| ||| |||| Sbjct 359 ACTTAAAAACGGTGAGGGCATTAGCCTTCTCAATGACTACCAAATCCGTTGATTCGCTCA 418 Query 27724 T 27724 | Sbjct 419 T 419 >seq49821 Length=2150 Score = 242 bits (268), Expect = 1e-59 Identities = 457/666 (69%), Gaps = 38/666 (6%) Strand=Plus/Minus Query 25662 TGCCATTAAGCAGCCGCTCCTTCTAATTCG--TCTCGTCTGATGTTGTAAACGTCCTGCG 25719 |||||||| || | |||||||| | || | || || |||| || || |||| || Sbjct 1986 TGCCATTATGCGGTAGCTCCTTCAAGCTCTGATTTCTTC--ATGTCATAGACTTCCTTCG 1929 Query 25720 CTTTATGCTGCTCCGGTGTGCCTTCGAGCATCTTCCACGCTTTGGCGAACGCCTGTTTAA 25779 ||||| ||||||||| || || || ||||||| ||| |||||||| || | ||| || | Sbjct 1928 CTTTAGCCTGCTCCGGAGTTCCGTCAAGCATCTGCCATGCTTTGGCAAATGACTGCTTGA 1869 Query 25780 GCTCTTCTACGGTGTTTTTCTGCATTGCTGCGTCAGTGAATGCTTTTAGAACCTGTTCAG 25839 | ||||| || | || | | || || |||| ||| || |||| ||| | Sbjct 1868 GATCTTCAGGATTGGTCTTATTAAGCGCAGCCTCAGAGAAGGCAGCGAGAA--TGTC--G 1813 Query 25840 GTGTAGGTGATGGTTTTGA-TTGCTTTGCT-----GCTGCGTTCTGCTGATGTTTATGCT 25893 | | ||| |||||||| ||||| || |||| ||||||| || ||||| Sbjct 1812 GCG--GGTTTTGGTTTTGGCTTGCTCTGTGCGGGCGCTGATGTCTGCTGCTGGCGATGCT 1755 Query 25894 CGTCGGTATCTGCATCTTTAGCATCATCAATGCCGAACAAACCATTGAGGCAATACTTGC 25953 ||| ||| || ||||| || | ||||||||||| ||||| || || ||||| ||||||| Sbjct 1754 CGTTGGTGTCCGCATCCTTTGAGTCATCAATGCCAAACAATCCGTTAAGGCAGTACTTGC 1695 Query 25954 GTGCATAAGAGCTTGTAGCTCCCGTAACTTGTGCAGAATCCATTCCTTTCTNNNNNNNNN 26013 | ||||| || || || || || ||||| ||||||| ||||| ||||| | Sbjct 1694 GGGCATATGAACTGGTTGCGCCTGTAACCTGTGCAGCGTCCATGCCTTTTTTGACTCTTC 1635 Query 26014 NNNNNNNNNNTAGCGCGGTTGCCGTA------TGACTGTTTTCGCCATCAGTAATAGTTG 26067 |||| |||| ||| ||| | | ||||||||||| || | || Sbjct 1634 CTCAC-------GCGCCATTGCTGTAGCGACGTGAGTTGTCTCGCCATCAGTTATTGATG 1582 Query 26068 CCGTGGCTTTCACGTAATACCGATCACCAATCAACACAACTTCATCGCTGATTGATAAAA 26127 | || || ||||||||| |||||||| | || | ||||| ||||| | || Sbjct 1581 CAGTTGCCCGCACGTAATAGCGATCACCTACTGGAACTATCTCATCAGAAATTGAAAGAA 1522 Query 26128 ACAGACCATTCAGTAACGGCTTAACGCCTTCAAGAATGTCTTCGCAGCTTCTGTATTTAT 26187 |||| || || || | ||||| || || |||||||||||||| ||||| | ||||| | Sbjct 1521 ACAGTCCGTTGAGGAGTGGCTTTACTCCCTCAAGAATGTCTTCACAGCTGCGATATTTGT 1462 Query 26188 ATTTGCCGAATGAGTTGTACTGATTCTTTGGCGCGTTCAGATTCTCCTG-AATAGCTGCC 26246 | |||||| | ||||||||||||||||||||| ||||| || ||| | | | || Sbjct 1461 ACTTGCCG-AGCTGTTGTACTGATTCTTTGGCGCATTCAGCGTCCGCTGTATTCTCAGCG 1403 Query 26247 AGTCTTGCGTAAAATT-CTTTGCTCA--TATGATTGTTCTCAGAATGGACACGGCCCAAG 26303 |||| ||| || |||| ||||||||| || | ||||||| || || ||||| || Sbjct 1402 AGTCGTGCATAGAATTCCTTTGCTCACTTACCA----CCTCAGAACGGGCATGGCCCGAG 1347 Query 26304 GAAATA 26309 |||||| Sbjct 1346 GAAATA 1341 >seq56092 Length=894 Score = 163 bits (180), Expect = 8e-36 Identities = 180/237 (76%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 30865 GCAAACAAACGCAACGAGGCTCT-ACGAATCGAGAGTGCGTTGCTTAACAAAATCGCAAT 30923 ||||| |||||||||||||| || | || || | || |||||||| ||||| |||||| | Sbjct 593 GCAAAGAAACGCAACGAGGCGCTGAAGATTCAA-AGCGCGTTGCTCAACAAGATCGCATT 535 Query 30924 GCTTGGAACTGAGAAGACAGCGGAAGCTGTGGGAGTTGATAAGTCGCAGATCAGCAGGTG 30983 ||| || || ||||||||||| | |||||| || || |||||| | ||||| ||| | || Sbjct 534 GCTCGGCACCGAGAAGACAGCAGCAGCTGTTGGTGTGGATAAGGCACAGATAAGCCGCTG 475 Query 30984 GAAGAGGGATTGGATTCCAAAGTTCTCAATGCTGCTTGCTGTTCTTGAATGGGGTGTCGT 31043 ||| | || ||| | || |||||| ||||| | ||||| || || || ||||| |||| Sbjct 474 GAAACGCGACTGGCTGCCGAAGTTCGCAATGTTACTTGCAGTGCTGGAGTGGGGAATCGT 415 Query 31044 TGACGACGACATGGCTCGATTGGCACGACAAGTTGCTTCGATTCTCACCAATAAAAA 31100 ||| ||||| ||||||| || || || || || || ||| || || || |||| Sbjct 414 TGATGACGAGATGGCTCATTTAGCGCGGCAGGTGGCAATGATACTGACAAAAGAAAA 358 >seq57448 Length=845 Score = 158 bits (174), Expect = 3e-34 Identities = 312/458 (68%), Gaps = 13/458 (3%) Strand=Plus/Plus Query 15135 GAGGTGATTGACGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCGAATTCGAC 15194 |||||||| ||| ||| |||||||| ||||| |||||||||||||| | || | ||| Sbjct 243 GAGGTGATAGACAGCAAGCTGCGCTATCCGAATACCGCGCTGCTCTATATTGAGGTAGAC 302 Query 15195 TCAAGCCAGTTCAACGGCTCTATTCCTCAAATTTCATGCGAACCGCGCGGCCGCGTTATC 15254 | || ||||| || || ||| ||||| | ||| |||| || | | Sbjct 303 GCCAGTCAGTTTAATGGTCAGGCACCTAAAATTACCTGCAAACCAAAAGGTAAGCTGGTG 362 Query 15255 CGCGTTCCAGATACCTACGACCCTGAAACCCGCACTTATAGCGGTACATGGACCGGTGCG 15314 ||||| || ||||| ||||| | || |||| |||| |||| ||||| |||| Sbjct 363 CGCGTGCCTACGACCTATGACCCGGTAAGTCGCAGCTATAACGGTTCATGGCAGGGTGAT 422 Query 15315 TTTAAGTGGGCATGGACGGATAACCCTGCGTGGATTTTTTACGACCTGGTTGTTTCTGAC 15374 || || | || | || | ||||| || |||||||||||||| |||||| | ||| Sbjct 423 TTCAAATACGCCTATACCAACAACCC-GCATGGATTTTTTACGATCTGGTTCTG---GAC 478 Query 15375 CGG--TTCGGCCTTGGGCACC-GTTTGACCGCTGCGAATATTGATAAATGGACGCTTTAT 15431 | || | |||| ||| || | || | | |||||||| ||| || || Sbjct 479 AAGATTTATGGTATGGGAACCCGTGTCGATGCATCCATGATTGATAAGTGGGAACTATAC 538 Query 15432 CAGGTTGCTCAGTATTGTGATCAGATGGTGCCAGACGGCAAAGGGGGCAACGGTACAGAA 15491 |||| ||||||||||||||| ||||| | ||| ||| |||||| || Sbjct 539 GCCATTGCCCAGTATTGTGATCAGCCCGTGCCGAATGGCGCAGG------CGGTACCGAG 592 Query 15492 CCACGTTATACCTGCAACGTGTACATTCAGGACCGGAACGACGCCTACACAGTCCTGCGT 15551 ||||| | |||||||||||| | ||||||| ||| | | ||||||||||| || || Sbjct 593 CCACGATTTACCTGCAACGTTTTCATTCAGAACCAGCAGGACGCCTACACCGTTCTCAAG 652 Query 15552 GATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGG 15589 || ||||||| ||||||||||| || || | |||||| Sbjct 653 GACATTGCCGCCATCTTCCGTGGAATTACTTTCTGGGG 690 >seq55112 Length=707 Score = 150 bits (166), Expect = 5e-32 Identities = 254/363 (70%), Gaps = 6/363 (2%) Strand=Plus/Plus Query 30256 GCCAAGAGCTGACGCAAGTTCTGGTAAAAAGCGTGGTCGCTTAGTTTTACCGTTTTCGAG 30315 ||| || ||| ||| ||||| || | |||| |||| |||||||| ||||| || | Sbjct 337 GCCTAGCGCTCTCGCCAGTTCAGGCAGGTAGCGCGGTCTTTTAGTTTTCCCGTTCTCCAA 396 Query 30316 CTGCTCTATAGACTGCTGGGTAGTCCCCACCTTTTGAGCAAGTTCAGCCTGGTTAAGTCC 30375 |||||| |||| ||||||| || ||| | ||| |||||| ||||| ||| | || || Sbjct 397 CTGCTCAATAGCTTGCTGGGATGTACCCGCTCTTTCAGCAAGCTCAGCTTGGGTTAGCCC 456 Query 30376 AAGCTGAATTCTTTTGCTTTTTACCCTGGAAGAAATACT---CATAAGC-CACCTCTGTT 30431 | || ||| || || ||| | | ||| | ||| || |||||| | Sbjct 457 TAACTCGCTTCGCTTAGATTGTACGCGTTTCGCGATAGTTGTCATCAGAACACCTCATTC 516 Query 30432 ATTTACCTCCAATCTTCACAAGAAAAACTGTATTTGACAAACAAGATACATTGT-ATGAA 30490 || || || ||||||||| |||||||||||||||||| || |||| || || Sbjct 517 ATGGGAACGGGATGTTTACAAGAAAAGCTGTATTTGACAAACAAGGTAACTTGTAATTAA 576 Query 30491 AATACAAGAAAGTTTGTTGATGGAGGCGATATGCAAACTCTTTCTGAACGCCTCAAGAAG 30550 |||||||||| ||||| | |||||| ||||||||| | || || |||||||| | Sbjct 577 TATACAAGAAAATTTGTCAAAGGAGGCTGTATGCAAACAATCTCGGATCGCCTCAAACAA 636 Query 30551 AG-GCGAATTGCGTTAAAAATGACGCAAACCGAACTGGCAACCAAAGCCGGTGTTAAACA 30609 || ||||| | | |||| | || ||||| ||||||||| || || || |||||||| Sbjct 637 AGAACGAATGGAGCTAAACCTTACCCAAACTGAACTGGCAGTTAAGGCAGGGGTTAAACA 696 Query 30610 GCA 30612 ||| Sbjct 697 GCA 699 >seq72432 Length=1353 Score = 149 bits (164), Expect = 2e-31 Identities = 252/365 (69%), Gaps = 0/365 (0%) Strand=Plus/Plus Query 29816 ACACCGATAATCTTGCAGTTCCCGTTGATAGGAGTCATAGGCCATGAAGGGTTCAGGCCT 29875 || || ||||| |||||||| |||| ||||| ||| ||| | ||||| || || ||| Sbjct 617 ACGCCAATAATTTTGCAGTTACCGTCTATAGGGATCAGAGGGTAGGAAGGATTTAGTCCT 676 Query 29876 TTCAGGTACTTCTGCCCGCCATCTATAACCAGTTTCTTGAATGTTGCTTCGTTCGCGTCA 29935 || || || || ||||||| ||| |||| |||||| || || ||||| || || || ||| Sbjct 677 TTAAGATATTTTTGCCCGCTATCAATAATCAGTTTTTTAAAGGTTGCCTCATTAGCATCA 736 Query 29936 GTCAGTTTGGCTACAACAAGGCTTCCATTCACTGGCTCGCGTCCAGTATCTACTAACACC 29995 ||| || || | || ||||| || ||| |||||| | || ||||| | | ||| Sbjct 737 ACCAGCTTTGCAATTACCAGGCTGCCGTTCTTTGGCTCTCTGCCGGTATCAAAGAGAACC 796 Query 29996 ATATGACCTTCAGGGATGCTTTGACCTACAGGTGAGGTCATGGAATCACCTTCAACCTTC 30055 | | ||| ||||||||||| | || || || || ||||| || || || | ||| | Sbjct 797 AAAGTACCCTCAGGGATGCTCAGCCCAACTGGAGAAGTCATCGAGTCGCCCTGCACCCTA 856 Query 30056 AGCCAGAATCCATCGCCTAATAAGTTAACGTCACTGTCATACCATTCATCAATGTCCTTG 30115 ||||| |||||| | ||| | | | | || || ||||||||| || | || Sbjct 857 AGCCAAAATCCAGCCCCTTCAATGCGAGCCTCTGATTCGTACCATTCAGAAACTTGCTGT 916 Query 30116 ATATCGTAGGGTTCACAAGCTTCACACCACGAACCAGCTCTAACCATGCTAATCAATGGA 30175 | || ||| || ||| ||| || ||| | || || || ||| ||| ||||| ||| Sbjct 917 AAATTGTAAGGCTCAACAGCCTCTTTCCATGCGCCCGCGCTTACCCAGCTGATCAAAGGA 976 Query 30176 TATTT 30180 || || Sbjct 977 TACTT 981 >seq38457 Length=3703 Score = 145 bits (160), Expect = 2e-30 Identities = 161/207 (78%), Gaps = 12/207 (6%) Strand=Plus/Plus Query 37161 GTGTTCTTTCCGATGGTTTTCGTAAGCGACTTTGCGGTTTTTTAGAAACTGATCACAAAG 37220 ||| |||||||||| ||||||||| |||||||||||| ||||||||||| || |||||| Sbjct 2837 GTGCTCTTTCCGATAGTTTTCGTATGCGACTTTGCGGGTTTTTAGAAACGGACCACAAAA 2896 Query 37221 A-TAAATGCAAACGA-AGAAATGTATCTGGCCGTAGCTTAACCGCTAAACACCAGTGA-G 37277 | ||||||||||||| || | || | | | ||| |||| || || | | | | Sbjct 2897 AGTAAATGCAAACGATAGTGA-GTTTAAAGTAGCAGCCTAACGGCCAACGCGCTTTCATG 2955 Query 37278 GTATTCCAGTTCCTCATCAACGAATCTGGCGCACT--GGCCC---GGTGTGATTAATAA- 37331 ||||||||||||| | | ||||||||||||| | ||||| | |||||||||||| Sbjct 2956 GTATTCCAGTTCCATGTAACCGAATCTGGCGCATTGCGGCCCTGAGATGTGATTAATAAA 3015 Query 37332 --TGGGCACACAACAGGTAAGAGCATT 37356 |||||||||||||||||||||||| Sbjct 3016 TCAGGGCACACAACAGGTAAGAGCATT 3042 >seq53795 Length=382 Score = 143 bits (158), Expect = 7e-30 Identities = 118/144 (82%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 40714 CAGCTGATTACGCCGTCGGTGAGGCATTCGGTGGCCGGGTGATTTATCCGTGTTACTCGC 40773 |||| || ||||| || ||||| || | ||||||||||| || |||||||||||||||| Sbjct 132 CAGCCGACTACGCGGTAGGTGATGCGTATGGTGGCCGGGTTATCTATCCGTGTTACTCGC 191 Query 40774 TGGTGGATCACGCTGACCTCCCGACGGTTGAGCGTCACCCTGACAACGAACCGAGGACGG 40833 |||||||||| || ||||| || |||||||||||||||| ||||| || ||| |||| | Sbjct 192 TGGTGGATCATGCAGACCTGCCTGCGGTTGAGCGTCACCCGGACAATGAGCCGCGGACAG 251 Query 40834 AACGCCGCCGCGCATGGAGACTGG 40857 ||||||| | || ||| | |||| Sbjct 252 AACGCCGAAGAGCCTGGCGGCTGG 275 >seq28323 Length=1613 Score = 138 bits (152), Expect = 3e-28 Identities = 207/290 (71%), Gaps = 3/290 (1%) Strand=Plus/Plus Query 40283 AGACATAAAATTTGTGGTGGTCGGCCATCACATCCGCTTAGGACATGCACAACGTCTTGC 40342 ||| || || || || || ||| ||||||||| ||| |||||| ||| |||| Sbjct 1254 AGAAATTAAGTTCGTCGTCGTCTGCCATCACACGCGCGGTCACCATGCAGAACA-CTTGG 1312 Query 40343 TGCGCT-GCTGCATGCTCATCTGCTGGTTGATGACGATAACCACGGCGCGAACTGGAATC 40401 | | | ||||| |||||| |||||| ||||||| | | | || || || |||||||||| Sbjct 1313 CGTGGTCGCTGCGTGCTCACCTGCTGATTGATGAGGCTCAGCATGGGGCAAACTGGAATC 1372 Query 40402 ATCGCCGCGCGCTTGAGTGGGCAGCAGAACAAACCTGCCGGGTAGTGGTGTTGGAAGACG 40461 | ||| |||| | |||||||||| | || ||||| ||||| | ||||||| | Sbjct 1373 ACCGCTGCGCTATCGAGTGGGCAGGCCAGCAGGATTGCCGCGTAGTAATACTGGAAGATG 1432 Query 40462 ACGCACTGCCAGTACATGGATTCGCCGAAAAGGTAACGTACTGGCTGGCGCGCTTCCCTG 40521 | || |||| ||| ||| ||| || ||||||||| |||||| | || ||||||| Sbjct 1433 ATGCGCTGCTGGTAGGTGGCTTCATCG-AAAGGTAACAGCCTGGCTTGACCGGTTCCCTG 1491 Query 40522 ACGACATGCTGAGCTTTTATCTCGGTACCGGCCGACCGCCGCAGTATCAG 40571 | || ||||| || ||| | || |||||| | || || ||||||||| Sbjct 1492 ATGATTTGCTGTCTTTCTATTTAGGGACCGGCAGGCCACCACAGTATCAG 1541 >seq56093 Length=508 Score = 136 bits (150), Expect = 1e-27 Identities = 146/189 (77%), Gaps = 3/189 (2%) Strand=Plus/Minus Query 30865 GCAAACAAACGCAACGAGGCTCT-ACGAATCGAGAGTGCGTTGCTTAACAAAATCGCAAT 30923 ||||| |||||||||||||| || | || || | || |||||||||||||| |||||| | Sbjct 188 GCAAAGAAACGCAACGAGGCGCTGAAGATTCAA-AGCGCGTTGCTTAACAAGATCGCATT 130 Query 30924 GCT-TGGAACTGAGAAGACAGCGGAAGCTGTGGGAGTTGATAAGTCGCAGATCAGCAGGT 30982 ||| || || ||||| ||||| | ||||| || || |||||| | ||||| ||| | | Sbjct 129 GCTCCGGCACAGAGAAAACAGCCGCCGCTGTTGGTGTGGATAAGGCACAGATAAGCCGCT 70 Query 30983 GGAAGAGGGATTGGATTCCAAAGTTCTCAATGCTGCTTGCTGTTCTTGAATGGGGTGTCG 31042 |||| | || ||| | || |||||| ||||| | || || || || |||||||| ||| Sbjct 69 GGAAACGCGACTGGCTGCCTAAGTTCGCAATGTTACTAGCAGTGCTGGAATGGGGAATCG 10 Query 31043 TTGACGACG 31051 |||| |||| Sbjct 9 TTGATGACG 1 >seq34527 Length=8391 Score = 136 bits (150), Expect = 1e-27 Identities = 159/207 (77%), Gaps = 12/207 (6%) Strand=Plus/Plus Query 37161 GTGTTCTTTCCGATGGTTTTCGTAAGCGACTTTGCGGTTTTTTAGAAACTGATCACAAAG 37220 ||| |||||||||| ||||||||| |||||||||||| ||||||||||| || |||||| Sbjct 3080 GTGCTCTTTCCGATAGTTTTCGTATGCGACTTTGCGGGTTTTTAGAAACGGACCACAAAA 3139 Query 37221 A-TAAATGCAAACGA-AGAAATGTATCTGGCCGTAGCTTAACCGCTAAACACCAGTGA-G 37277 | ||||||||||| | || | || | | | ||| |||| || || | | | | Sbjct 3140 AGTAAATGCAAACAATAGTGA-GTTTAAAGTAGCAGCCTAACGGCCAACGCGCTTTCATG 3198 Query 37278 GTATTCCAGTTCCTCATCAACGAATCTGGCGCACT--GGCCC---GGTGTGATTAATAA- 37331 ||||||||||||| | | |||||||||| || | ||||| | |||||||||||| Sbjct 3199 GTATTCCAGTTCCATGTAACCGAATCTGGCACATTGCGGCCCTGAGATGTGATTAATAAA 3258 Query 37332 --TGGGCACACAACAGGTAAGAGCATT 37356 |||||||||||||||||||||||| Sbjct 3259 TCAGGGCACACAACAGGTAAGAGCATT 3285 >seq53794 Length=578 Score = 102 bits (112), Expect = 2e-17 Identities = 129/175 (74%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 40398 AATCATCGCCGCGCGCTTGAGTGGGC-AGCAGAACAAACCTGCCGGGTAGTGGTGTTGGA 40456 ||||| |||||||| |||| ||||| ||| | || ||||| |||||| | |||| Sbjct 182 AATCACCGCCGCGCCATTGAATGGGCCAGCC-AGCAGGATTGCCGTGTAGTGATACTGGA 240 Query 40457 AGACGACGCACTGCCAGTACATGGATTCGCCGAAAAGGTAACGTACTGGCTGGCGCGCTT 40516 |||||| || || | ||| |||| ||| ||||||||||| | |||||| | || || Sbjct 241 AGACGATGCGCTACTGGTAGATGGCTTCACCGAAAAGGTAGCAGCCTGGCTTGAACGTTT 300 Query 40517 CCCTGACGACATGCTGAGCTTTTATCTCGGTACCGGCCGACCGCCGCAGTATCAG 40571 |||||| || ||||| || ||| | || |||||| | || || ||||||||| Sbjct 301 CCCTGATGATTTGCTGTCTTTCTATTTAGGCACCGGCAGGCCACCACAGTATCAG 355 >seq56549 Length=565 Score = 100 bits (110), Expect = 8e-17 Identities = 141/197 (72%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 40350 CTGCATGCTCATCTGCTGGTTGATGACGATAACCACGGCGCGAACTGGAATCATCGCCGC 40409 |||| |||||| ||| || ||||||| | | | ||||| ||||||||||||||||||||| Sbjct 196 CTGCGTGCTCACCTGATGATTGATGAAGGTCAGCACGGAGCGAACTGGAATCATCGCCGC 137 Query 40410 GCGCTTGAGTGGGCAGCAGAACAAACCTGCCGGGTAGTGGTGTTGGAAGACGACGCACTG 40469 || | ||||||||| || || |||| ||| ||| | | || || ||||| ||| Sbjct 136 GCTTTAGAGTGGGCAAGCGAGCAGGATTGCC-GGTGGTGATCGTAGAGGATGACGCGCTG 78 Query 40470 CCAGTACATGGATTCGCCGAAAAGGTAACGTACTGGCTGGCGCGCTTCCCTGACGACATG 40529 || || | || ||| ||||| || | ||| || | || ||||| |||| || Sbjct 77 CCGGTGCCTGACTTCTTAAGCAAGGTGACTGAATGGTTGTCACGTTTCCCGAACGATCTG 18 Query 40530 CTGAGCTTTTATCTCGG 40546 | ||||| ||||| || Sbjct 17 ATTAGCTTCTATCTGGG 1 >seq83242 Length=311 Score = 98.7 bits (108), Expect = 3e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 3765 CTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATCGCAGCCATG 3824 ||| ||||||||||| ||||||| | || |||||||| || || | | || | | Sbjct 222 CTGAGCGAAATCAGCATCTGCACCATGCCGGCCAACGAGCACGCCACCGTGGCCTCGCTC 163 Query 3825 AAAAGTGTCGATGGTATTGAAACGATTCGTGATGTGGAGAACTGGCTGAGGGATTCAGTC 3884 || || | || || || |||| ||||| |||| |||| |||||||| | ||| ||| Sbjct 162 AAGAGCATGGACGGCATCGAAAGCATTCGCGATGCGGAGCACTGGCTGCGAGATGCAGCT 103 Query 3885 GGCCTCACCAAATCACAGGCAGTTGGGCTAATTGCCCGGTTTAAGTCAGCGATTCGGAGC 3944 |||||| |||| || |||| | | | || ||||| | ||||| || ||||||| Sbjct 102 GGCCTCTCCAAGTCCGAGGCGCAGGCGTTCATCGCCCGCATCAAGTCCGCAGTTCGGAGT 43 Query 3945 GAGTCCGAGGGC 3956 |||||||| ||| Sbjct 42 GAGTCCGAAGGC 31 >seq52587 Length=1677 Score = 82.4 bits (90), Expect = 2e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 15127 GCTTCACCGAGGTGATTGACGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCG 15186 || ||||||| ||||| |||||||| |||||||| || ||||| |||||||||||||||| Sbjct 1333 GCATCACCGAAGTGATCGACGCCAAGCTGCGCTATCCCAACACGGCGCTGCTCTACGTCG 1392 Query 15187 AATTC 15191 | ||| Sbjct 1393 AGTTC 1397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132562566414000