Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_019723.1 Length=47090 Score E Sequences producing significant alignments: (Bits) Value seq47236 127 6e-25 seq46655 91.5 4e-14 seq48546 86.0 2e-12 seq64133 82.4 2e-11 seq64132 82.4 2e-11 seq56092 80.6 8e-11 >seq47236 Length=1665 Score = 127 bits (140), Expect = 6e-25 Identities = 96/113 (85%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 44491 GAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCT 44550 ||||||||| |||| ||||| | |||| |||||||||| | |||||||| || |||||| Sbjct 717 GAACTGAAGTTGGCAAACGCCACGATTAATGACATGCAGGTACGTCAGCGAGACGTTGCT 658 Query 44551 GCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTGAAAATGA 44603 || |||||||| ||||| || ||||||||||||||||| || |||||||||| Sbjct 657 GCCCTCGATGCGAAATATACCAAGGAGTTAGCTGATGCGAACACTGAAAATGA 605 >seq46655 Length=2837 Score = 91.5 bits (100), Expect = 4e-14 Identities = 86/108 (80%), Gaps = 4/108 (4%) Strand=Plus/Plus Query 22215 TTGCGCCGCTTCAGGATGCTGCAGATCTGGAAATTGCAACGGAGGAAG--AAACCTCGTT 22272 |||||||||||||||||||| |||||||||| |||||||| || |||| ||| | |||| Sbjct 2282 TTGCGCCGCTTCAGGATGCTTCAGATCTGGATATTGCAACTGAAGAAGAAAAAGCGCGTT 2341 Query 22273 GCTGGAAGCCTGGAAGAAGTATCGGGTGTTGCTGAACCGTGTTGATAC 22320 | ||||||| || ||||| ||| |||| ||||| || ||||| Sbjct 2342 --TACTTTCCTGGAAAAAATATCGAGTGATGCTTAACCGCGTGGATAC 2387 >seq48546 Length=353 Score = 86.0 bits (94), Expect = 2e-12 Identities = 115/156 (74%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 34620 GCAATTTTTCGCGCCAGTCGCTGCTCTTGCAT-TGCCTGTTCACGTTGAGCCTGTCTGCG 34678 || ||||| || ||||| || ||| ||| | | |||| ||||||| ||| |||||| Sbjct 284 GCGATTTTGCGTGCCAGGCG-TGCATCTGCTTCTACCTGCTCACGTTTAGCTGCTCTGCG 226 Query 34679 TGCTCTGCGGCGATTTCTGGCGTTATCGTCAGCCAGATATGTAATGACTACTGTCATGTT 34738 |||||| ||| |||||||||| | |||||||| || |||||||||||||| Sbjct 225 CGCTCTGTAGCGCGCCTTGGCGTTATCCTTTGCCAGATAAGTGATGACTACTGTCATAAG 166 Query 34739 GACCTCCGATGATTGACTTTGGCGGTGACGCGCCGG 34774 ||||| | | |||| ||| || ||||| | ||||| Sbjct 165 TACCTCAGGTAATTGGCTTAGGTGGTGA-GGGCCGG 131 >seq64133 Length=746 Score = 82.4 bits (90), Expect = 2e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 44681 CCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGG 44740 || ||||| || |||||||| ||| | | ||||||||| ||||| ||||| | |||| Sbjct 280 CCTCCGCCACCCGCGTGGATGATGATGGCAGCCCCCGACTTACAGACGCCGCTCAGCGGG 221 Query 44741 ATTATTTCACCCTCAGAGAG 44760 |||||||||||||||||||| Sbjct 220 ATTATTTCACCCTCAGAGAG 201 >seq64132 Length=632 Score = 82.4 bits (90), Expect = 2e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 44681 CCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGG 44740 || ||||| ||||||||||| ||| | | ||||||||| ||||| ||||| | ||| Sbjct 196 CCTCCGCCACCGGCGTGGATGATGATGGCAGCCCCCGACTTACAGACGCCGCTCAGTGGG 137 Query 44741 ATTATTTCACCCTCAGAGAG 44760 |||||||||||||||||||| Sbjct 136 ATTATTTCACCCTCAGAGAG 117 >seq56092 Length=894 Score = 80.6 bits (88), Expect = 8e-11 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 36759 CCAAAGATGGCCATGCTTCTGGCTGTGCTGGAGTGGGGTGTTGAAGACGAGGAGTTGGCG 36818 || ||| | || ||| | || || |||||||||||||| | | || || ||| |||| Sbjct 458 CCGAAGTTCGCAATGTTACTTGCAGTGCTGGAGTGGGGAATCGTTGATGACGAGATGGCT 399 Query 36819 GAACTGGCTAAGAAAGTAGCCAGAATGCTGACAAAAGAAAAAGCCCCGAAGAACGGCGAA 36878 | | || | | || || | || |||||||||||||| ||| | ||| ||||| Sbjct 398 CATTTAGCGCGGCAGGTGGCAATGATACTGACAAAAGAAAA-GCCTC-AAGTTGCGCGAA 341 Query 36879 TT-CTTCGAGGCCTAATGTAGAAAGACTGGATCAATCCACGGGAGTAATTATGACAAAAC 36937 ||| ||||| | ||| || |||||||||||| ||| |||||||||||| |||| Sbjct 340 CAACTTTGAGGC-TGATGCGAAATGACTGGATCAATTCACAGGAGTAATTATGCCAAAGA 282 Query 36938 AACTCAGTCCTTACCAGGACAAAATTCACAAACACAT 36974 ||| | | ||||||| | | |||||| |||| Sbjct 281 AACACGTTGTGTACCAGGCGGATTTACACAAAAACAT 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150333426727200