Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_019768.1 Length=41468 Score E Sequences producing significant alignments: (Bits) Value seq84058 407 4e-109 seq93587 370 3e-98 seq49821 268 2e-67 seq37401 183 8e-42 seq57448 152 1e-32 seq33657 129 2e-25 seq34834 116 1e-21 seq52587 82.4 2e-11 >seq84058 Length=491 Score = 407 bits (450), Expect = 4e-109 Identities = 374/469 (80%), Gaps = 3/469 (1%) Strand=Plus/Minus Query 4646 TGCTGAACGGCGACGGTACCGGAGAT-AACCTGGAAGGGCTGAACAAAGTGGCAACCGCC 4704 |||||||||| ||||| | || || ||||| ||||| || ||| ||||| || | Sbjct 490 TGCTGAACGGAGACGGCAAAGGCGACGAACCTTGAAGGTCT-AACGCGGTGGCCACACCG 432 Query 4705 TATGACACCTCGCTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCACGCTATT 4764 |||||| | || ||||||||| |||| || || || |||||||| || ||||| || || Sbjct 431 TATGACGCTTCTCTGAATGCCTCCGGGGATACGCGTGCTGACATCATTGCTCATGCGATC 372 Query 4765 TATCAGGTGACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAACCCGCGCGACTGG 4824 || ||||| || |||||||| |||||||| |||||||| |||| || || ||||||||| Sbjct 371 TACCAGGTCACTGAGTCTGAATTCAGCGCGTCCGGTATTATCCTTAATCCTCGCGACTGG 312 Query 4825 CACAACATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCA 4884 |||| |||||| |||| |||||| ||| || || |||||||| || ||||| ||||| Sbjct 311 CACAGCATCGCACTGCTTAAAGACCGTGATGGTCGTTATATCTTTGGCGGTCCGCAGGCG 252 Query 4885 TTCACCAGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGC 4944 |||||||| |||| |||||||||| |||| || || || || | |||||| |||| Sbjct 251 TTCACCAGCAACAACATGTGGGGCCTGCCTGTTGTGCCTACGCGTTCACAGGCCAGCGGC 192 Query 4945 ACCTTTACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGCATGGATGCCACC 5004 || ||||| || || ||||| || |||||||| ||||||||||| ||||||||||| || Sbjct 191 ACATTTACTGTTGGTGGTTTTGACATGGCCTCTCAGGTCTGGGACCGCATGGATGCAACG 132 Query 5005 GTGGAAGTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTGACCATCCTGTGC 5064 || || || ||||| |||||||| || ||||| || ||||| |||||||| |||||||| Sbjct 131 GTTGAGGTCAGCCGCGAAGACCGGGACAACTTTGTCAAAAA-ATGCTGACAATCCTGTGT 73 Query 5065 GAAGAGCGTCTGGCGCTGGCGCATTATCGCCCGACAGCAATCATCAAGG 5113 || |||||||| || ||||| || |||||||| |||||||||||||||| Sbjct 72 GAGGAGCGTCTTGCTCTGGCTCACTATCGCCCTACAGCAATCATCAAGG 24 >seq93587 Length=445 Score = 370 bits (410), Expect = 3e-98 Identities = 341/430 (79%), Gaps = 1/430 (0%) Strand=Plus/Minus Query 1831 GTGAATGCGGTGGTGGTGAAAGATGCTGCTGGCAACCGCAAGCTCGATAAATCCAAAGCA 1890 || ||||| ||| | || ||||| || || |||||| | ||||| || |||||||||||| Sbjct 445 GTTAATGCCGTGATCGTCAAAGACGCAGCGGGCAACAGAAAGCTGGACAAATCCAAAGCA 386 Query 1891 ACGGGCCGTATTGATGGCATGGTCGCAATGACAATGTCCGTTGGTGCTGCTAATGGGGAA 1950 || ||||| ||||| || |||||||||||||| ||||| |||| || ||||| ||||| Sbjct 385 ACAGGCCGCATTGACGGTATGGTCGCAATGACCATGTCTATTGGCGCGGCTAACGGGGAG 326 Query 1951 GTTACCGAACAGGGTGGTGACTTCGACGACTTCATTTTCCGACCGCTGAGCATGTGATGG 2010 || || |||||||||||||| || |||||||||||| |||||||||||||||||||| Sbjct 325 GTCACTTTGCAGGGTGGTGACTTTGAAGACTTCATTTTCAGACCGCTGAGCATGTGATGG 266 Query 2011 AAGAACCTAAATACACGATTGACCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGCAGT 2070 ||||||| |||| || ||||| || || ||||||||||| |||||||| ||| |||| Sbjct 265 AAGAACC-GAATATACAATTGATCTACGGACCAATAACGGTCTGTGGGCAAAGCTTCAGT 207 Query 2071 CCTGGTTTGTCGGCGGGCGTTTAGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTT 2130 | ||||| ||||||||||| ||||| || || ||||||||||| ||| | || || || | Sbjct 206 CATGGTTCGTCGGCGGGCGCTTAGTTACGCCTAATCAGGGCTCGCAGTCCGGTCCGGTGT 147 Query 2131 CGGCCCACGGACACCTGGGCGATTCATCCATTAACGATGAACGGATACTGCAAATTTCGA 2190 | || ||| ||||| ||||| || | | ||||| ||||| || | || || |||| Sbjct 146 CTGCATCCGGGCACCTTGGCGACTCCGCAGTCAACGACGAACGAATTTTACAGATATCGA 87 Query 2191 CTGTGTGGCGCTGCGTGAGCCTGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCT 2250 | || ||||| || ||||| |||||||||||||| || |||| | || |||||||| | Sbjct 86 CGGTCTGGCGTTGTGTGAGTCTGATTTCAACGCTGACATCATGTCTGCCACTTGATGTGT 27 Query 2251 TCGAAACAGA 2260 |||| || || Sbjct 26 TCGAGACGGA 17 >seq49821 Length=2150 Score = 268 bits (296), Expect = 2e-67 Identities = 463/660 (70%), Gaps = 26/660 (4%) Strand=Plus/Minus Query 26616 TGCCATTAAGCAGCCGCTCCTTCTAATTCG--TCTCGTCTGATGTTGTAAACGTCCTGCG 26673 |||||||| || | |||||||| | || | || || |||| || || |||| || Sbjct 1986 TGCCATTATGCGGTAGCTCCTTCAAGCTCTGATTTCTTC--ATGTCATAGACTTCCTTCG 1929 Query 26674 CTTTGTGCTGCTCCGGTGTGCCTTCGAGCATCTTCCACGCTTTGGCGAACGCCTGTTTAA 26733 |||| ||||||||| || || || ||||||| ||| |||||||| || | ||| || | Sbjct 1928 CTTTAGCCTGCTCCGGAGTTCCGTCAAGCATCTGCCATGCTTTGGCAAATGACTGCTTGA 1869 Query 26734 GCTCTTCCACGGTGTTTTTCTGCAATGCTGCGTCAGTGAATGCTTTTAGAACCTGTTCAG 26793 | ||||| || | || | | || || |||| ||| || |||| ||| | Sbjct 1868 GATCTTCAGGATTGGTCTTATTAAGCGCAGCCTCAGAGAAGGCAGCGAGAA--TGTC--G 1813 Query 26794 GTGTAGGTGATGGTTTTGA-TTGCTTTGCT-----GCTGCGTTCTGCTGATGTTTATGCT 26847 | | ||| |||||||| ||||| || |||| ||||||| || ||||| Sbjct 1812 GCG--GGTTTTGGTTTTGGCTTGCTCTGTGCGGGCGCTGATGTCTGCTGCTGGCGATGCT 1755 Query 26848 CGTCTGTATCTGCATCTTTCGCATCATCTATGCCGAACAAACCATTGAGGCAATACTTGC 26907 ||| || || ||||| || | ||||| ||||| ||||| || || ||||| ||||||| Sbjct 1754 CGTTGGTGTCCGCATCCTTTGAGTCATCAATGCCAAACAATCCGTTAAGGCAGTACTTGC 1695 Query 26908 GTGCATAAGAGCTTGTAGCTCCAGTAACTTGTGCAGAATCCATTCCTTTCTTGCTTTCTT 26967 | ||||| || || || || || ||||| ||||||| ||||| ||||| ||| | ||| Sbjct 1694 GGGCATATGAACTGGTTGCGCCTGTAACCTGTGCAGCGTCCATGCCTTTTTTGACT-CTT 1636 Query 26968 CCTCTCGTGCAAGAGCGGTTGCCGTATGACTGTTTTCGCCATCGGTAATAGTTGCCGTGG 27027 |||| || || | || || || ||| | | |||||||| || || | ||| || | Sbjct 1635 CCTCACGCGCCATTGCTGTAGCGACGTGAGTTGTCTCGCCATCAGTTATTGATGCAGTTG 1576 Query 27028 CTTTCACGTAATACCGATCACCAATCAACACAACTTCATCGCTGATTGATAAAAACAGGC 27087 | ||||||||| |||||||| | || | ||||| ||||| | |||||| | Sbjct 1575 CCCGCACGTAATAGCGATCACCTACTGGAACTATCTCATCAGAAATTGAAAGAAACAGTC 1516 Query 27088 CATTCAGTAACGGCTTAACGCCTTCAAGAATGTCTTCGCAGCTTCTGTATTTATATTTGC 27147 | || || | ||||| || || |||||||||||||| ||||| | ||||| || |||| Sbjct 1515 CGTTGAGGAGTGGCTTTACTCCCTCAAGAATGTCTTCACAGCTGCGATATTTGTACTTGC 1456 Query 27148 CGAATGAGTTGTACTGATTCTTTGGCGCGTTCAGATTCTCCTG-AATAGCTGCCAGTCTT 27206 || | ||||||||||||||||||||| ||||| || ||| | | | || |||| | Sbjct 1455 CG-AGCTGTTGTACTGATTCTTTGGCGCATTCAGCGTCCGCTGTATTCTCAGCGAGTCGT 1397 Query 27207 GCGTAAAATT-CTTTGCTCA--TATGATTGTTCTCAGAATGGACACGGCCCAAGGAAATA 27263 || || |||| ||||||||| || | ||||||| || || ||||| |||||||| Sbjct 1396 GCATAGAATTCCTTTGCTCACTTACCA----CCTCAGAACGGGCATGGCCCGAGGAAATA 1341 >seq37401 Length=2265 Score = 183 bits (202), Expect = 8e-42 Identities = 167/211 (79%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 19807 ACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCTGTTCCGTGGCCTTCCG 19866 |||| ||||||||||||||||| || ||||| || || || || ||||||||||| |||| Sbjct 1 ACCTCGGTTTGGGAGAAGGCTCCGCTTTACCGGTGGGGGTGCCGGTTCCGTGGCCATCCG 60 Query 19867 CCACTCCGCCAACAGGCTGGCTGAAATGCAACGGTGCGGTTTTTTCTGCTGAAGAATACC 19926 | | |||||||| || ||| | ||||| || ||||| | | | | ||| | |||| Sbjct 61 CGAACCCGCCAACTGGTTGGTTAAAATGTAATGGTGCAGCTATCACCTCTGCTCAGTACC 120 Query 19927 CGGAACTGGCAAAGGCTTATCCAACAAATAAATTGCCAGATTTACGTGGTGAGTTTATTC 19986 || ||||||||||| |||||| || ||||| || ||||||||||| |||||||||| Sbjct 121 CGCTTCTGGCAAAGGCCTATCCATCATTAAAATTACCGGATTTACGTGGGGAGTTTATTC 180 Query 19987 GTGGCTGGGATGACGGGCGTGGGGTCGATTC 20017 |||| |||||||| ||||| || |||||||| Sbjct 181 GTGGATGGGATGATGGGCGGGGAGTCGATTC 211 >seq57448 Length=845 Score = 152 bits (168), Expect = 1e-32 Identities = 311/458 (68%), Gaps = 13/458 (3%) Strand=Plus/Plus Query 15081 GAGGTGATTGACGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCGAATTCGAC 15140 |||||||| ||| ||| |||||||| ||||| |||||||||||||| | || | ||| Sbjct 243 GAGGTGATAGACAGCAAGCTGCGCTATCCGAATACCGCGCTGCTCTATATTGAGGTAGAC 302 Query 15141 TCAAGCCAGTTCAACGGCTCTATTCCTCAAATTTCATGCGAACCGCGCGGCCGCGTTATC 15200 | || ||||| || || ||| ||||| | ||| |||| || | | Sbjct 303 GCCAGTCAGTTTAATGGTCAGGCACCTAAAATTACCTGCAAACCAAAAGGTAAGCTGGTG 362 Query 15201 CGCGTTCCAGATACCTACGACCCTGAAACCCGCACTTATAGCGGTACATGGACCGGTGCG 15260 ||||| || ||||| ||||| | || |||| |||| |||| ||||| |||| Sbjct 363 CGCGTGCCTACGACCTATGACCCGGTAAGTCGCAGCTATAACGGTTCATGGCAGGGTGAT 422 Query 15261 TTTAAGTGGGCATGGACGGATAACCCTGCGTGGATTTTTTACGACCTGGTTGTTTCTGAC 15320 || || | || | || | ||||| || |||||||||||||| |||||| | ||| Sbjct 423 TTCAAATACGCCTATACCAACAACCC-GCATGGATTTTTTACGATCTGGTTCTG---GAC 478 Query 15321 CGG--TTCGGCCTTGGGCACC-GTTTGACCGCTGCGAATATTGATAAATGGACGCTTTAT 15377 | || | |||| ||| || | || | | |||||||| ||| || || Sbjct 479 AAGATTTATGGTATGGGAACCCGTGTCGATGCATCCATGATTGATAAGTGGGAACTATAC 538 Query 15378 CAGGTTGCTCAGTATTGTGATCAGATGGTACCAGACGGCAAAGGGGGCAACGGTACAGAA 15437 |||| ||||||||||||||| || || | ||| ||| |||||| || Sbjct 539 GCCATTGCCCAGTATTGTGATCAGCCCGTGCCGAATGGCGCAGG------CGGTACCGAG 592 Query 15438 CCACGTTATACCTGCAACGTGTACATTCAGGACCGGAACGACGCCTACACAGTCCTGCGT 15497 ||||| | |||||||||||| | ||||||| ||| | | ||||||||||| || || Sbjct 593 CCACGATTTACCTGCAACGTTTTCATTCAGAACCAGCAGGACGCCTACACCGTTCTCAAG 652 Query 15498 GATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGG 15535 || ||||||| ||||||||||| || || | |||||| Sbjct 653 GACATTGCCGCCATCTTCCGTGGAATTACTTTCTGGGG 690 >seq33657 Length=2348 Score = 129 bits (142), Expect = 2e-25 Identities = 179/248 (72%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 19805 AAACCTTGGTTTGGGAGAAGGCTCTGCATTA-CCTGTTGGTG-TCCCTGTTCCGTGGCCT 19862 |||||| ||||| || ||||||||||| || || ||||| | | || ||||| |||||| Sbjct 2198 AAACCTCGGTTTAGGCGAAGGCTCTGCCTTTGCCGGTTGGCGATGCCGGTTCCCTGGCCT 2139 Query 19863 TCCGCCACTCCGCCAACAGGCTGGCTGAAATGCAACGGTGCGGTTTTTTCTGCTGAAGAA 19922 || | | ||||||||| || ||| | || || || ||||| | ||| |||| Sbjct 2138 TCGGAAAATCCGCCAACTGGGTGGTTAAAGTGTAATGGTGCCGCTTTCAGCGCTGCCACC 2079 Query 19923 TACCCGGAACTGGCAAAGGCTTATCCAACAAATAAATTGCCAGATTTACGTGGTGAGTTT 19982 || ||| ||||| | || |||||| | |||||| || ||||| ||||| || ||| Sbjct 2078 TATCCGCTTCTGGCTAGAGCCTATCCATCGCTTAAATTACCGGATTTGCGTGGGGAATTT 2019 Query 19983 ATTCGTGGCTGGGATGACGGGCGTGGGGTCGATTCAGGGCGAGCGCTGCTGTCCGCACAA 20042 ||||||||||||||||| |||||| | ||| || || | |||| || ||||| Sbjct 2018 ATTCGTGGCTGGGATGATGGGCGTAACATTGATAACGGAAGAACAGTGCTTTCTGCACAG 1959 Query 20043 GGTGATGC 20050 | |||||| Sbjct 1958 GATGATGC 1951 Score = 111 bits (122), Expect = 4e-20 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 19845 GTCCCTGTTCCGTGGCCTTCCGCCACTCCGCCAACAGGCTGGCTGAAATGCAACGGTGCG 19904 || || ||||| ||||| || | | || ||| |||||||| ||| || || |||| Sbjct 3 GTGCCGGTTCCCTGGCCGTCTGAAATACCACCATCAGGCTGGTTGACCTGTAATGGTGAT 62 Query 19905 GTTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCAACAAATAAATTGCCA 19964 |||| || | || |||||| ||||| || || |||||| || |||||| || Sbjct 63 ACTTTTAGCGCAGCTGATTACCCGCTTCTGGCGAAAGCCTATCCATCACTTAAATTACCG 122 Query 19965 GATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGTGGGGTCGAT 20015 ||||||||||| |||||||||||||||||||||| || ||||| ||||| Sbjct 123 GATTTACGTGGAGAGTTTATTCGTGGCTGGGATGGTGGTCGTGGTATCGAT 173 >seq34834 Length=462 Score = 116 bits (128), Expect = 1e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 19821 GAAGGCTCTGCATTACCTGTTGGTGTCCCTGTTCCGTGGCCTTCCGCCACTCCGCCAACA 19880 ||||||||||| || || |||||||| || | ||| ||||| || | | ||| ||||| Sbjct 461 GAAGGCTCTGCTTTGCCGGTTGGTGTACCGGCTCCCTGGCCGTCGGAAAATCCACCAACC 402 Query 19881 GGCTGGCTGAAATGCAACGGTGCGGTTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAG 19940 || ||| |||| || || ||||| | |||| ||| ||| ||| |||||||| Sbjct 401 GGGTGGTTGAAGTGTAATGGTGCTGCTTTTAGTGCCACCACATATCCGCTTCTGGCAAAA 342 Query 19941 GCTTATCCAACAAATAAATTGCCAGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGAC 20000 | || || | |||||| || ||| ||||||| ||||||||||||||||||||||| Sbjct 341 GTGTACCCGTCGCTTAAATTACCCGATCTACGTGGAGAGTTTATTCGTGGCTGGGATGAT 282 Query 20001 GG 20002 || Sbjct 281 GG 280 >seq52587 Length=1677 Score = 82.4 bits (90), Expect = 2e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 15073 GCTTCACCGAGGTGATTGACGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCG 15132 || ||||||| ||||| |||||||| |||||||| || ||||| |||||||||||||||| Sbjct 1333 GCATCACCGAAGTGATCGACGCCAAGCTGCGCTATCCCAACACGGCGCTGCTCTACGTCG 1392 Query 15133 AATTC 15137 | ||| Sbjct 1393 AGTTC 1397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132370863498000