Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_019910.1 Length=159624 Score E Sequences producing significant alignments: (Bits) Value seq31280 158 1e-33 >seq31280 Length=10079 Score = 158 bits (174), Expect = 1e-33 Identities = 291/424 (69%), Gaps = 2/424 (0%) Strand=Plus/Minus Query 73413 CTTCCCACCCCGATTATGGCAGGTGTTCGTACTCCTACCCGTCAGTTCAGTTCCTGTGTC 73472 || || || || || ||| | || || ||||| || |||||||||||||| ||||||||| Sbjct 1742 CTGCCGACGCCAATCATGTCGGGAGTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTC 1683 Query 73473 CTGATCAAAACTGGTGACACCCTGGACTCTATCAACGCAACGGCCAAGACCATCGTTGAC 73532 ||||| || ||| |||| |||||| || |||||||| || ||| | || || | Sbjct 1682 CTGATTGAATGTGGCGACAGCCTGGATTCCATCAACGCGACCTCCAGCGCTATTGTGAAA 1623 Query 73533 TATGTGTCCAAACGCGCAGGTATCGGCTTCGACGTCGGGGC-TATCCGTGGGATTGGCAG 73591 || || || ||||||||||||| || | ||| |||| | |||||| | | | ||||| Sbjct 1622 TACGTTTCACAACGCGCAGGTATTGGTATTAACG-CGGGTCGTATCCGCGCGCTGGGCAG 1564 Query 73592 TCCTATTCGCGGCGGAGAGATGGTTCACACAGGCCTGATCCCATTCATCAAGTATCTCAC 73651 || ||||||||||| || | || || || ||||| ||| |||| | || Sbjct 1563 CCCGATTCGCGGCGGTGAAGCTTTCCATACCGGTTGTATCCCGTTCTACAAGCACTTCCA 1504 Query 73652 TGGGGCGCTCAAGTCGTGCTCCCAGGGCGGCATTCGTGGTGGTGCGGCAACAGCGTACAT 73711 ||| | || || || || ||||||||| | ||||| || || || || || | Sbjct 1503 GACAGCGGTGAAATCCTGTTCGCAGGGCGGCGTCCGTGGCGGCGCAGCGACGCTGTTCTA 1444 Query 73712 CCCTCTGTGGCATTACCAGTTCGATGACGTCGTTGTACTGAAGAATAACCGTGGTACTGA 73771 || |||||||| | | || | | | || ||||| || ||||||||| || Sbjct 1443 TCCGATGTGGCATCTGGAAGTAGAAAGCCTGTTAGTCCTGAAAAACAACCGTGGTGTGGA 1384 Query 73772 AGAGAACCGCGAACGCCGTATCGACTATGGTATTCAGATCAACCGCGTGATGTTTGAGCG 73831 || ||||||| ||| | || ||||| ||| | ||| ||||| |||||| |||| Sbjct 1383 AGGTAACCGCGTACGTCACATGGACTACGGTGTGCAGCTCAACAAAATGATGTACCAGCG 1324 Query 73832 CCTG 73835 |||| Sbjct 1323 CCTG 1320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509837048192000