Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_019919.2 Length=122696 Score E Sequences producing significant alignments: (Bits) Value seq33499 533 1e-146 >seq33499 Length=26748 Score = 533 bits (590), Expect = 1e-146 Identities = 622/840 (74%), Gaps = 0/840 (0%) Strand=Plus/Minus Query 39518 TTACTTGTTACGCATATCCATAATCATCTGGCCATCATAACCAGTACCTACAACAGTCTG 39577 ||| |||||||| ||||||||||| || || || || || ||| | ||| || || Sbjct 24100 TTATTTGTTACGAGCATCCATAATCAACTTACCTTCGTAGTCACCACCAATAACTGTTTG 24041 Query 39578 AGGAACGCCACCCTGATATTTTTCAGCGCGTACCATATCAACTTCCAGCTGCTTCCAGCG 39637 || || ||||| || ||||| ||||| ||| ||| |||||||| || || ||||| || Sbjct 24040 TGGTACACCACCTTGGTATTTCTCAGCACGTTTCATTTCAACTTCGAGTTGTTTCCAACG 23981 Query 39638 GATCATCTCTGGCGTGATGGTACGCTGCAGAGCGTTGTTAGCCTCAGCTTCTTTCTTAGC 39697 ||||||||||| ||||| || ||||| | ||||||| ||||||||||| | ||| Sbjct 23980 AATCATCTCTGGAGTGATTGTTTTCTGCAACACACTGTTAGCTTCAGCTTCTTTTTGAGC 23921 Query 39698 TGCATACAGTTTAGCATCAGCATCACGTTCGTTAGCTACTGCCATGTTTTCACGAGCGGA 39757 ||||| | ||||||||| ||||| |||||||| || || || | ||| || Sbjct 23920 AGCATATAATTTAGCATCTGCATCTCGTTCGTTTGCCTGGGCTTCATTATTACGGGCTTC 23861 Query 39758 ACGATCAGCTTCAGCTTGTTTAACTTTCTGCTGTGCTTCTTGTTCTACACGAGCCAGCTC 39817 |||||||| || || | |||||| ||||||| ||||| |||| || |||| || Sbjct 23860 TCGATCAGCCTCTGCCTTCTTAACTGCTTGCTGTGTTTCTTTAGCTACTCGGTCCAGATC 23801 Query 39818 AGCTTTAGCGGCGTTGACTTGTTCTTCACGAACTTTTGTGTTCTGAACCTGTTCCATGAT 39877 ||| | || ||||| || ||||||||||||| ||||| || ||||| | |||||| Sbjct 23800 AGCCTGTGCTGCGTTAACCTGTTCTTCACGAATCTTTGTATTTGTTACCTGCTTCATGAT 23741 Query 39878 TACTGGTGGCAGAGTAATATCTTGAAGGAATACTTGCTTAACGGTGTAACCATACGGACG 39937 ||| |||| || |||||||| | ||| | || || || || |||||||| ||||| Sbjct 23740 TACATCAGGCAAGGTGATATCTTGCAAGAAGATTTCTTTTACAGTATAACCATAAGGACG 23681 Query 39938 AGCATATTCTTCTACTTCTTGCTGGATAGCAGTTTGAAGTTGAGCCTGAATTTTTGCATC 39997 || || |||| | ||| | | | | || | || |||||||| | || | Sbjct 23680 TGCGTAGGCTTCAATTTCAGCTTTTACTGAATCCTGCAACTGCGCCTGAATCTCAGCGTT 23621 Query 39998 AAACAGATCCTGTGCTTTTGGTACAGATTTACCAAATTCACGAATGGTAGACAGCATCTT 40057 |||| |||||||||||| || || ||||||||||| || || | || || | | ||| Sbjct 23620 GAACAAATCCTGTGCTTTCGGGACTGATTTACCAAACTCTCGGACAGTGGATAAAAGCTT 23561 Query 40058 CTCTTCAACGTACTTATTCAGAGCTTGATCTTGCGTACCTGCGTTAACACGGTTAATTGG 40117 | ||||| || |||| ||||||||| ||||| || ||||| |||| ||||| || || Sbjct 23560 TTGCTCAACATATTTATCCAGAGCTTGCTCTTGAGTGCCTGCATTAATTCGGTTCATAGG 23501 Query 40118 TGCTTTAGAGCCATCGAACTGCAACATAACAGTAATGTCAACAGTAGATTTAAACTTATC 40177 ||| ||||| ||||| |||||||||||||| || || || || || |||||||||||||| Sbjct 23500 TGCCTTAGAACCATCAAACTGCAACATAACGGTCATATCCACTGTTGATTTAAACTTATC 23441 Query 40178 CTGGCTAGGAACTTGCAGCTTATCCAGCTTCATAGAGATATCTTTCGTGCTGAAAGTGTC 40237 ||| || || ||||||| ||||| | || ||||||||| || |||||||| || Sbjct 23440 CTGACTCGGTACTTGCAATTTATCATATGTTATTTTGATATCTTTTGTACTGAAAGTCTC 23381 Query 40238 AAAAGAAGCAAATGGGTTAACGATATGGAAACCTGGCAATACTGGATTAGGATTAACTTT 40297 ||| |||||||||||||| | |||||| |||||| ||| ||||||||||||||||| Sbjct 23380 AAAGCTTGCAAATGGGTTAACCACATGGAACCCTGGCTTTACAGGATTAGGATTAACTTT 23321 Query 40298 ACCCAGGAAGGTTTGAGTTTTAACTGTACCATCCTGAACTACGGTATACGAATTAAGTGC 40357 ||||| |||||||| ||||| ||||||||||| || || | | |||| ||||| || || Sbjct 23320 ACCCATAAAGGTTTGTGTTTTTACTGTACCATCTTGCACGATGATATAGGAATTTAGAGC 23261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391879093923100