Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_019923.1 Length=42689 Score E Sequences producing significant alignments: (Bits) Value seq82134 114 4e-21 >seq82134 Length=394 Score = 114 bits (126), Expect = 4e-21 Identities = 187/258 (72%), Gaps = 10/258 (4%) Strand=Plus/Minus Query 1186 GACAAGGTGTGGGAAGTGGCTGAGGGTGCGCTGACTGACGAGAACACCGAGATCATATGG 1245 |||| ||||||||||||||||| || || |||| ||||| ||||| ||||| ||| Sbjct 386 GACAGCGTGTGGGAAGTGGCTGAAGGCGCA-TGACAGACGAAAACACGATCATCATCTGG 328 Query 1246 GTG-GCATTCGGCAACCCGACGC-GCAACACAGGCCGATTCCGCGAGTGCTTCCGCAAGT 1303 | | ||||||||||| || | | |||||||||||||||||||||||||| ||||| Sbjct 327 ATTCGTGTTCGGCAACCCCACACAGGAACACAGGCCGATTCCGCGAGTGCTTTCGCAAAA 268 Query 1304 TCAAGCA-CCGGTGGA-AGTGCAAGCAGATCGATGCCAGGACTGTTGAAGGCACCAACAA 1361 || ||| || |||| | || ||| ||||| |||| || ||||| ||||| Sbjct 267 TC--GCAGGCGCTGGATACAGC-GGCAAATCGACAGTCGGACGGTGCCTGGCACGAACAA 211 Query 1362 GACCCAGCACCAGAAGTGGATTGATGACTGGGGTGAAGATTCCGACTTCGTCCGCGTCCG 1421 || ||| | | ||||| || | |||| || ||||| ||| || || | || || Sbjct 210 GAAGAAGCTCGACGAGTGGGTTAACGACTATGGCGAAGACAGCGA-TTTGTAAG-GTGCG 153 Query 1422 TGTGCGCGGCATGTTCCC 1439 |||||||||||||| || Sbjct 152 AGTGCGCGGCATGTTTCC 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136272017838600