Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2641 120 2e-21 seq59051 96.9 2e-14 >seq2641 Length=263 Score = 120 bits (132), Expect = 2e-21 Identities = 146/198 (74%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| || || || ||||| || ||| |||||| || || ||||| || || || Sbjct 241 ACGAAGTCGAAGAACCAGATGCAGAGTAGATTCTTTCTGAATGTTGTAATCGGCAAGGGT 182 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || |||||| | ||||| |||||||| || || ||||||||||| || ||||| || Sbjct 181 TCGACCATCTTCCAACTGCTTACCAGCAAAGATGAGTCGTTGTTGATCGGGGGGAATACC 122 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||||| || ||||||| || |||||||| | | | |||||| Sbjct 121 CTCCTTGTCTTGAAT-TTGGTTTTGACATTGTCGATAGTATCCGAAGATTCAACTTCAAG 63 Query 480731 GGTAATAGTTTTACCGGT 480748 ||| ||||| || ||||| Sbjct 62 GGTGATAGTCTTGCCGGT 45 >seq59051 Length=1564 Score = 96.9 bits (106), Expect = 2e-14 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 474713 TATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCT 474772 || || || ||| |||||| | || || ||||| || || || || || || || | Sbjct 249 TACCTCGGTCAAACAGTAACACAAGCCGTTATTACGGTACCTGCTTACTTCAACGACAGT 190 Query 474773 CAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATT 474832 || ||||||||||| |||||||| || | ||| |||||||| | || | |||||| | Sbjct 189 CAGCGTCAAGCAACAAAAGATGCTGGTAAAATCGCAGGTCTGGAAGTACTGCGTATTGTC 130 Query 474833 AATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 || || ||||||||||| ||||| || || ||| | || || Sbjct 129 AACGAGCCAACAGCAGCAGCACTGGCATACGGTTTGGAGAA 89 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3262590000784400