Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_020198.1 Length=36947 Score E Sequences producing significant alignments: (Bits) Value seq74251 152 1e-32 >seq74251 Length=708 Score = 152 bits (168), Expect = 1e-32 Identities = 323/470 (69%), Gaps = 28/470 (6%) Strand=Plus/Minus Query 3301 CATGAAATCAAGGCGCTGCGCCCGTTCATTCGCCGC--GACTTCAGCAAGCTGCTCCCGA 3358 || ||| ||||||| |||| || ||| || ||| ||| || || ||| |||| Sbjct 684 CAGGAACTCAAGGCCCTGCAACCTTTCCGCCGACGCTCGAC--CAAAAACCTGTTCCCCG 627 Query 3359 CCGACGTCTATTCCTGCG-ACGGCCACACGTTCGACGCCGAGGTCCAGCACCCGATGCAC 3417 ||||||| | | ||| ||||||||| ||||||||||||| || |||| || Sbjct 626 GGGACGTCT-TCACGGCGGACGGCCACAAGTTCGACGCCGAGATCATCAACCCTCTGACG 568 Query 3418 GGCCGGCCCTTCCGGCCGGAAATCACCACCATCATCGACATCCGTACCCGTCGAATTCCG 3477 |||| ||| | | | |||||||||||||| | |||||| || ||||| || | | Sbjct 567 GGCCAGCCGTACAGACCGGAAATCACCACGGTTATCGACGTCGCCACCCGGCGCGTAGTG 508 Query 3478 GGCTGGTCCACCGGCCTGGCGGAGTCGGCCCTGGTGGTGGTCGATGCCTTGCGCGACGCC 3537 || || |||| ||| ||||||||| | | ||| | || ||| |||| |||||| Sbjct 507 GGTATTTCGGTCGGCGAGGCCGAGTCGGCCATCGGTGTGCTGGACGCC-TGCGTGACGCC 449 Query 3538 TGCACCAAGGGCG-GCATCCCGGCCATCTTCTACGTGGACAACGGCTCGGGCTACGTCAA 3596 | || || |||| || | |||||||||||||| || ||||||| || ||| Sbjct 448 ATC----CGGTCGTGCATGTTCGCTGTGTTCTACGTGGACAATGGTTCGGGCTTCGCCAA 393 Query 3597 CCACATGATGCGCGACGAGGCGGTCGGCCTTATGGGCCGCCTGGGCATCGA-TATGAAGA 3655 ||| ||||||| ||||| ||| |||||||||| ||| |||| | Sbjct 392 TGACACAGTGCGCGA------GGTCG------TGGACCGCCTGGGCGGCGACCATGACGC 345 Query 3656 ACAGCCTGCCATACAACAGCCAGGCGCG-GGGCGTGATCGAGCGCGTTCACCAGAGTCTC 3714 || ||||| |||||||||||||| || || | || ||||||| | ||||||| | Sbjct 344 ACTCGCTGCCCTACAACAGCCAGGCACGCGGTCCTG-TCGAGCGAG-CCACCAGACCATT 287 Query 3715 TGGATTCGGGCCGCAAAGGAACTGCCCGGCTACATCGGCGCCGACATGGA 3764 ||| | || || ||| | ||| || ||||||||||||| |||||||| Sbjct 286 TGGGTCAATGCGGCCAAGAAGCTGACCAGCTACATCGGCGCAGACATGGA 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117926048777400