Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_020203.1 Length=37095 Score E Sequences producing significant alignments: (Bits) Value seq74251 147 5e-31 seq1029 80.6 6e-11 >seq74251 Length=708 Score = 147 bits (162), Expect = 5e-31 Identities = 322/470 (69%), Gaps = 28/470 (6%) Strand=Plus/Minus Query 3028 CATGAAATCAAGGCACTGCGCCCGTTCATTCGCCGC--GACTTCACCAAGCTGCTCCCGA 3085 || ||| ||||||| |||| || ||| || ||| ||| || || ||| |||| Sbjct 684 CAGGAACTCAAGGCCCTGCAACCTTTCCGCCGACGCTCGAC--CAAAAACCTGTTCCCCG 627 Query 3086 CCGACGTCTATTCCTGCG-ACGGCCACACGTTCGACGCCGAGGTCCAGCACCCGATGCAC 3144 ||||||| | | ||| ||||||||| ||||||||||||| || |||| || Sbjct 626 GGGACGTCT-TCACGGCGGACGGCCACAAGTTCGACGCCGAGATCATCAACCCTCTGACG 568 Query 3145 GGCCGGCCCTTCCGGCCGGAAATCACCACCATCATCGACATCCGTACCCGTCGAATTCCG 3204 |||| ||| | | | |||||||||||||| | |||||| || ||||| || | | Sbjct 567 GGCCAGCCGTACAGACCGGAAATCACCACGGTTATCGACGTCGCCACCCGGCGCGTAGTG 508 Query 3205 GGATGGTCCACCGGCCTGGCCGAGTCGGCCCTGGTGGTTGTCGATGCCCTGCGCGACGCC 3264 || || |||| ||||||||||||| | | || | || | |||||| |||||| Sbjct 507 GGTATTTCGGTCGGCGAGGCCGAGTCGGCCATCGGTGTGCTGGACG-CCTGCGTGACGCC 449 Query 3265 TGCACCAAGGGCG-GCATTCCGGCCATCTTCTACGTGGACAACGGCTCAGGCTACATAAA 3323 | || || |||| || | |||||||||||||| || || |||| | || Sbjct 448 ATC----CGGTCGTGCATGTTCGCTGTGTTCTACGTGGACAATGGTTCGGGCTTCGCCAA 393 Query 3324 CCACATGATGCGCGACGAGGCGGTCGGCCTTATGGGCCGCCTGGGCATCGA-CATGAAAA 3382 ||| ||||||| ||||| ||| |||||||||| ||| ||||| Sbjct 392 TGACACAGTGCGCGA------GGTCG------TGGACCGCCTGGGCGGCGACCATGACGC 345 Query 3383 ACAGCCTGCCCTACAACAGCCAGGCGCG-GGGCGTGATTGAGCGCGTCCACCAGAGCCTG 3441 || |||||||||||||||||||| || || | || | ||||| | |||||||| | | Sbjct 344 ACTCGCTGCCCTACAACAGCCAGGCACGCGGTCCTG-TCGAGCGAG-CCACCAGACCATT 287 Query 3442 TGGATTCGGGCCGCCAAGGAACTGCCCGGATACATCGGCGCCGACATGGA 3491 ||| | || |||||| | ||| || | ||||||||||| |||||||| Sbjct 286 TGGGTCAATGCGGCCAAGAAGCTGACCAGCTACATCGGCGCAGACATGGA 237 >seq1029 Length=3852 Score = 80.6 bits (88), Expect = 6e-11 Identities = 109/148 (74%), Gaps = 8/148 (5%) Strand=Plus/Minus Query 9354 GACATGTACCAGGGAACGGCTGATGCACTCGATCTGATCTGCGCGGCCGGTGGCTTCGCG 9413 || ||||||||| | || || || || || || | ||||||||| ||||| |||||| Sbjct 3762 GAGATGTACCAGAGGACCGCCGAGGCCCTGGACCGGATCTGCGCCGCCGGCAGCTTCGAA 3703 Query 9414 -AGCCGGCCGAGGTGGTCACCTTGCTCCTACACAACGTTGCCGA---AATTGCTGAGCGT 9469 ||| |||||||||| | ||| |||| | ||| |||||| ||| || ||||| Sbjct 3702 CAGCGGGCCGAGGTGTTGACCCTGCTGATCCACTC---TGCCGATCAAATCGCCCAGCGT 3646 Query 9470 GACGCGTCACGTTTTG-CCGAATTGATC 9496 ||| ||||||||||| ||||| || || Sbjct 3645 GACATGTCACGTTTTGCCCGAAATGGTC 3618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118398915970200