Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_020416.1 Length=160221 Score E Sequences producing significant alignments: (Bits) Value seq31280 134 1e-26 seq73453 107 2e-18 >seq31280 Length=10079 Score = 134 bits (148), Expect = 1e-26 Identities = 273/402 (68%), Gaps = 4/402 (1%) Strand=Plus/Plus Query 133793 TTGATTTGCAGACCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTTC 133852 |||| |||| |||||| || | ||||| | |||||| | || ||||| |||||| Sbjct 1342 TTGAGCTGCACACCGTAGTCCATGTGACGTACGCGGTTACCTTCCACACCACGGTTGTTT 1401 Query 133853 TTTAATACCAACAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCA 133912 || | || |||||| |||| || || ||||||||||| ||||| | || || ||||| Sbjct 1402 TTCAGGACTAACAGGCTTTCTACTTCCAGATGCCACATCGGATAGAACAGCGTCGCTGCG 1461 Query 133913 CCACCACGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAA 133972 || ||||| || ||||| || ||||| ||||| || || ||||| || || || |||| Sbjct 1462 CCGCCACGGACGCCGCCCTGCGAACAGGATTTCACCGCTGTCTGGAAGTGCTTGTAGAAC 1521 Query 133973 GGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATC 134032 || || || ||||| |||| || | ||| ||| || || || Sbjct 1522 GGGATACAACCGGTATGGAAAGCTTCACCGCCGCGAATCGGGCTGCCCAGCGCGCGGATA 1581 Query 134033 ATACCGGCGTTGATGCCGATACCAGCTCGCTTGCTGATA--TACTTAATAATACTGTTAC 134090 ||| ||||| || || ||||| || || ||| ||| | || || | |||| | | Sbjct 1582 CGACCCGCGTTAATACCAATACCTGCGCG-TTG-TGAAACGTATTTCACAATAGCGCTGG 1639 Query 134091 TTGCCGCATTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACT 134150 | ||| || || |||| ||| |||||| |||||| | ||||| || || |||| Sbjct 1640 AGGTCGCGTTGATGGAATCCAGGCTGTCGCCACATTCAATCAGGACACAGGAGCTGAACT 1699 Query 134151 GACGAGTAGGAGTACGAGCCCCTGCCATAATCGGTGTAGGCA 134192 |||| || || ||||| | || | ||| || || || |||| Sbjct 1700 GACGGGTTGGCGTACGCACTCCCGACATGATTGGCGTCGGCA 1741 >seq73453 Length=612 Score = 107 bits (118), Expect = 2e-18 Identities = 139/186 (75%), Gaps = 12/186 (6%) Strand=Plus/Minus Query 130807 ACAAGCTTGATAATCTT---TTTGAGCTAAATGTAAATCATAATGTTCCTGTATAGAAAG 130863 |||||||| |||||||| ||| | |||||| |||| ||||||| | ||| || | Sbjct 451 ACAAGCTTTATAATCTTGGTTTTTAT---AATGTATATCAAAATGTTCTTTTATTGAGAC 395 Query 130864 GCACATTAAATTATCTAAATCATTATTTTCA--CGGTTC-CCGTCTTTATGATGAATTTC 130920 ||| ||||||| || || || | || ||| || || || | | ||||||| ||||| Sbjct 394 GCATTTTAAATTTTC-AATTC--TGTTATCAGACGAATCTCCATTTATATGATGTATTTC 338 Query 130921 ATAAGTTCTACCATTTTCATCTTTTGGTATAGGGCCGTTTTCTTTTATCCAAATTTTTCT 130980 ||| || |||||||||||||||||||||| ||||| | ||| ||| |||||||| Sbjct 337 GTAACTTATACCATTTTCATCTTTTGGTATTTCACCGTTATTAATTACCCATATTTTTCT 278 Query 130981 ATAATT 130986 |||||| Sbjct 277 ATAATT 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511744336628000