Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_020484.1 Length=147284 Score E Sequences producing significant alignments: (Bits) Value seq62284 89.7 5e-13 >seq62284 Length=976 Score = 89.7 bits (98), Expect = 5e-13 Identities = 159/224 (71%), Gaps = 11/224 (5%) Strand=Plus/Minus Query 120135 GGTGTTAGAGGCGGTTCAGCAACTGTACACTTTCCTATTTGGCACCAAGAAATAGAAGAT 120194 |||||| |||| || ||||||||||||||||||| | ||||| | || | |||||| Sbjct 220 GGTGTTCGAGGTGGAGCAGCAACTGTACACTTTCCACTATGGCATTACGAGTTTGAAGAT 161 Query 120195 ATACTTGTTTTA--AAAAACAATAAAGGTACGGAAGATAATAGAGTTAGAAAATTAGATT 120252 ||||| || |||| ||||||||||| ||| | || ||| | ||||||| Sbjct 160 ---CTTGTAGTACTGAAAATAATAAAGGTACAGAAACCTCACGTGTAAGACAGTTAGATT 104 Query 120253 ACTCTATACA-ATTATCAAAATTATTTTACGAAAGATTTATTAAGAATG-AAG-ATATAA 120309 | | | | || |||| ||||| | || || || | || ||| ||| | ||| |||| | Sbjct 103 ATTGTTTTCAGATTAACAAAACT-TTGTATCAACGTTTAATT--GAACGTAAGAATATTA 47 Query 120310 CTTTATTCTCTCCACATGATGTGCCAGGTTTATATGACGCATTT 120353 | || || || ||| |||||| || || ||||||| |||||| Sbjct 46 CATTCTTTTCACCAAGTGATGTTCCTGGACTATATGAAGCATTT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470413364272000