Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq44855 91.5 2e-13 seq45636 87.8 2e-12 seq89340 84.2 2e-11 seq85980 84.2 2e-11 >seq44855 Length=668 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 157690 CGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAA 157749 |||||||| |||||||||||||||||| || || |||| || ||| ||||||||| || Sbjct 438 CGGGGTGTGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACGAAGAGGCCGCAGGTTCAAA 379 Query 157750 TCCTGTCACCCCGAC 157764 ||||||||||||||| Sbjct 378 TCCTGTCACCCCGAC 364 >seq45636 Length=1761 Score = 87.8 bits (96), Expect = 2e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 156615 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTG 156672 ||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct 106 TAGCTCAACTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCGCAGGTTCGAGTCCTG 49 >seq89340 Length=694 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 157690 CGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAA 157749 ||| ||||||||||||||||||||||| | || |||| | |||||||||||||||| Sbjct 86 CGGAGTGTAGCGCAGCTTGGTAGCGCGTCTCGTTCGGGACGAGAAGGTCGCAGGTTCGAA 27 Query 157750 TCCTGTCACCCCGA-CTTATCAAAAC 157774 ||||||| | |||| | |||||||| Sbjct 26 TCCTGTCTCTCCGACCAAATCAAAAC 1 >seq85980 Length=428 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 157690 CGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAA 157749 ||| ||||||||||||||||||||||| | || |||| | |||||||||||||||| Sbjct 343 CGGAGTGTAGCGCAGCTTGGTAGCGCGTCTCGTTCGGGACGAGAAGGTCGCAGGTTCGAA 402 Query 157750 TCCTGTCACCCCGA-CTTATCAAAAC 157774 ||||||| | |||| | |||||||| Sbjct 403 TCCTGTCTCTCCGACCAAATCAAAAC 428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546855056748000