Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_020841.1 Length=40803 Score E Sequences producing significant alignments: (Bits) Value seq95765 91.5 4e-14 seq8663 80.6 7e-11 >seq95765 Length=439 Score = 91.5 bits (100), Expect = 4e-14 Identities = 130/178 (73%), Gaps = 4/178 (2%) Strand=Plus/Minus Query 13049 TGTCCAGTTATCGCACTGTCACAGCTTAACCGT-AGCTTAGAGAGCCGACCAAACAAACG 13107 || || ||| |||| |||||||| || ||||| ||||| |||||||| || | ||||| Sbjct 244 TGCCCTGTTGTCGCGCTGTCACAACTGAACCGACAGCTT-GAGAGCCGCGCAGATAAACG 186 Query 13108 GCCCA-TCATGAGCGACCTAAAAGAGTCAGGGGCCATTGAGGAAAACGCTGACGTGATTA 13166 || | | ||| | || || || || ||||| |||| | |||||||||| || Sbjct 185 TCCGAATAATG-GTGATCTTCGCGATTCCGGGGCTCTTGAACAGGACGCTGACGTCATCG 127 Query 13167 TGTTCCTGTACCGCGATGAGGTTTATAACGAAAACTCGGACCAAAAAGGTATTGCTGA 13224 | || | || ||||||||||| ||| ||||||||||||| | ||||| | ||||| Sbjct 126 TTTTTATCTATCGCGATGAGGTCTATCACGAAAACTCGGATGATAAAGGCGTCGCTGA 69 >seq8663 Length=2426 Score = 80.6 bits (88), Expect = 7e-11 Identities = 109/151 (72%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 13037 AAAGAGTTTAATTGTCCAGTTATCGCACTGTCACAGCTTAACCGTAGCTTAGAGAGCCGA 13096 |||||| | || || || || || || || || ||||| ||||| | | ||| ||| Sbjct 586 AAAGAGATGAAGTGCCCTGTCATTGCGCTATCCCAGCTCAACCGGGGACTGGAGTCCCGG 527 Query 13097 CCAAACAAACGGCCCATCAT-GAGCGACCTAAAAGAGTCAGGGGCCATTGAGGAAAACGC 13155 || ||||| ||||| | | | ||| || ||||| || ||||| ||| | |||| Sbjct 526 CCGAACAAGCGGCCTGGCCTTGCCCGATCTGCGTGAGTCCGGCGCCATCGAGCAGGACGC 467 Query 13156 TGACGTGATTATGTTCCTGTACCGCGATGAG 13186 |||||||| ||||||||||||||||| ||| Sbjct 466 GGACGTGATCATGTTCCTGTACCGCGACGAG 436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130246156179000