Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq54003 91.5 2e-13 >seq54003 Length=556 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 ||||||| | |||||||| |||||| | || |||||| || || || || || Sbjct 319 AGTCCATTCGGGCCATGATAAATTGCATACATGGCACTCATATTCGCTAGTAGCGCCTGC 378 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 |||||||||||||| || || || || || | | |||||||||||| || || ||||| Sbjct 379 GCTGTGCAGATGTTGCTTGTCGCCTTCTCGCGCCGAATATGCTGCTCCCTCGTCTGTAGG 438 Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439 || || ||| || ||||| || |||||| ||| || || | | ||||| Sbjct 439 GCCAACCTGGCGGCCGGATTACCCAGTCTGTCCTTGGACAAGCCAACCAACCGACCAGGA 498 Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCC 139492 | ||| | ||| ||||| || |||||||| || ||||| || || || Sbjct 499 AGCTTGCGCTTGTACTTTTCGTCACAAGCAAAGAAGGCGGCATGCGGCCCGCC 551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578055356356000