Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq41695 131 2e-25 seq97857 123 3e-23 seq57763 123 3e-23 seq79110 89.7 6e-13 >seq41695 Length=397 Score = 131 bits (144), Expect = 2e-25 Identities = 126/162 (78%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 || ||||||||||| || ||||||||||| || ||||| || |||||||| || || Sbjct 279 TCATTCGCCGAGCGGCTGATTGCGTTTGCGGTCGTTGAGGGGATTTTCTTCTCGGGATCG 220 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 |||||| | || || ||| ||||||| |||||| | ||||| ||||| | |||||| ||| Sbjct 219 TTCTGCTCGATCTACTGGCTGAAGAAACGGGGTATGATGCCGGGCCTTTCCTTCTCGAAT 160 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 || ||||| || || ||||| || || |||| || || ||| Sbjct 159 GAGCTTATCTCGCGCGATGAAGGGCTGCACCGCGATTTCGCC 118 >seq97857 Length=911 Score = 123 bits (136), Expect = 3e-23 Identities = 310/467 (66%), Gaps = 3/467 (1%) Strand=Plus/Minus Query 75600 TCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCA 75659 |||| ||||| | || |||||||| |||||||| | | ||| | || | || | Sbjct 766 TCGCAATCTACCTCGAGCCATGGCACGCCGATATATTTGGCTTCTTGGACCTTCGTAAGA 707 Query 75660 ACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACC 75719 |||| || | || || | ||| | | || | || | |||||||||| || || | Sbjct 706 ACCATGGCAAAGAGGAAGTTCGCGCTCGCGACTTATTCTACGCCCTGTGGATCCCGGATC 647 Query 75720 TTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCAC 75779 | ||||||||||| || | ||| ||| | ||| |||| | ||||| || || | Sbjct 646 TCTTCATGAAGCGTGTCCAAGAGAATGGGGAGTGGACTCTGATGTGTCCCAACGAGTGTC 587 Query 75780 CAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG 75839 | |||||| | |||| ||||| |||||||| ||||||||| || ||||| | Sbjct 586 CTGGTCTCGCGGACGTCTACGGTGATGAGTTTGAGGCCCTCTACGAAAGTTATGAGAAAA 527 Query 75840 AGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCAC 75899 || | || || ||| || | ||| | || | | | | || || ||| | | | Sbjct 526 AGAACAAAGGTCGTGAGACCGTTCGCGCC-CAGAAG-CTCGTATGCCATCCTCGAGGCTC 469 Query 75900 AGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACC 75959 | || |||||||| | || | |||||||||||||| ||||| ||| | | || |||| Sbjct 468 AAACTGAGACTGGTAATCCCTTCATGCTTTACAAGGACGCTTGCAAC-CGCAAAGCAACC 410 Query 75960 AAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAG 76019 | |||||| | || || ||| || || || | ||||| || ||| | |||||||| | Sbjct 409 AGAAGAATCTCGGCACTATCCGCAGTTCGAACTTATGCACTGAGATTGTTGAGTACACCG 350 Query 76020 ATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCA 76066 |||||| ||||| || || ||||| || | || || ||| Sbjct 349 CCCCAGATGAGGTTGCTGTCTGTAACTTGGCCTCTCTAGCACTGCCA 303 >seq57763 Length=521 Score = 123 bits (136), Expect = 3e-23 Identities = 243/354 (69%), Gaps = 13/354 (4%) Strand=Plus/Plus Query 177625 TGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTGGCAGCG 177684 || |||||| |||||||| | || || || ||||||||| | ||||| || | ||| Sbjct 99 TGGAGCATGCGCCACATGCCCTCTACGTACTCCTTGGCAAG-CCCCAATCCCGCTTGGCG 157 Query 177685 TTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTT--TG---ACGC 177739 | ||| || || || || |||| || | |||| | | |||| | || ||| Sbjct 158 TCGAGATTTCCTAGCTCCAGGACCTG-----CGCCTTGCCAAGTTTGATCTTGGCAACGG 212 Query 177740 CATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGA 177799 ||| ||||| || ||||| || || || || || ||||| || ||||||| Sbjct 213 TATCGGTAATTTTTCGCGTGACGAATTCACGGCCGCGAAGGGGCGATTCATGATTGAAGA 272 Query 177800 GGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAG 177859 | || |||||||||||| | ||||||||||| || || || ||| | | |||||| | Sbjct 273 GAATCCCGGAGCAGGCAAAAATACCATAGGACTCACGATAGTTTATCGTCATCCAGTGCG 332 Query 177860 CGGCCAATTTGGAGACGCCATAGACGGAT-CGTGGGTAGAAGGGTGTCTCCTCAGTTTGT 177918 | | ||| | || ||||| | | | || || |||||||| || ||| | ||| Sbjct 333 CATAGAGTTTTGCCACACCATA-AGGACTACGCGGATAGAAGGGCGTTGACTCTTTCTGT 391 Query 177919 GGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTATACACGA 177972 || |||| | || ||||||||||||||||| || ||||| ||||| | |||| Sbjct 392 GGGATTTCCTGAACCTTACCAAACATCTCCGAGGTAGAGGCCTGGTAAAAACGA 445 >seq79110 Length=913 Score = 89.7 bits (98), Expect = 6e-13 Identities = 142/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 |||||| ||||| ||||||| ||||| |||| || ||||| || || || || | Sbjct 709 CCCACAACACATGATCATGCGTGTCGCTGTCGGTATTCACGGCGAGGATATCGAAAAGGC 768 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCT 75329 | | || || |||||| | ||||| ||| ||| || | ||| || | ||||| || | Sbjct 769 CATCGAAACGTACGACTACATGTCACAAAAGTACTTT-ACTCATGCCTCCCCAACGCTTT 827 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| || || || || ||||||||||| |||||| || || | || ||||||| Sbjct 828 TCAACGCCGGCACCCCTTCGCCGCAGATGTCATCTTGCTTTCTGATTGACATGAAGGAGG 887 Query 75390 ACTCAATCAACGGTATCTATG 75410 || || | |||||||||| Sbjct 888 ACAGCATTGATGGTATCTATG 908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595597937264000