Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq62862 87.8 2e-12 seq10342 84.2 2e-11 >seq62862 Length=1236 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 18120 TCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAG 18179 |||| | |||||||||||||||| || ||||| ||| ||||||| || ||||||||| Sbjct 470 TCCCGTTGTTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAG 529 Query 18180 GTTCAAATCCTACCTGGGGAG 18200 |||| |||||||| ||||||| Sbjct 530 GTTCGAATCCTACTTGGGGAG 550 >seq10342 Length=7320 Score = 84.2 bits (92), Expect = 2e-11 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 161245 GTAGCTCAGC-GGATAGAGCAACCGCCTTCTAAGCGGTTGGTCGCAGGTTCAAATCCTGC 161303 |||||||||| |||||||||| ||||||||||||||| ||||||||||||| | |||||| Sbjct 1588 GTAGCTCAGCTGGATAGAGCATCCGCCTTCTAAGCGGATGGTCGCAGGTTCGAGTCCTGC 1529 Query 161304 C 161304 | Sbjct 1528 C 1528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560333867320000