Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_020866.1 Length=40231 Score E Sequences producing significant alignments: (Bits) Value seq48770 118 3e-22 >seq48770 Length=929 Score = 118 bits (130), Expect = 3e-22 Identities = 215/316 (68%), Gaps = 29/316 (9%) Strand=Plus/Plus Query 39939 GGGAGAGGAGCGGAATCGCATGAAGGCATCGAAGTTCACAGAGGCGCAGAAGGCGTTCAT 39998 || || |||||| | || |||||| |||||||| | |||||||||| || ||| | Sbjct 46 GGAAGCGGAGCG--AGCG-ATGAAGAGGTCGAAGTTTTCGGAGGCGCAGATCGCCTTCGT 102 Query 39999 CCTGAAGCAGGGCGAGGAAGGCACGCCGGTCGCAAAGATCTGCCGCAAGGCCGGGATCAG 40058 |||||||||| |||||| |||||| || | || | |||||||| |||||||||| Sbjct 103 GCTGAAGCAGGCCGAGGACGGCACGAGTGTTGGCGAGGTGTGCCGCAAA-CCGGGATCAG 161 Query 40059 CTAGGCGGCCTACTTCAACTGG---AAGAAGC----------------------GATATG 40093 | | ||| | | || | |||| |||||| ||| || Sbjct 162 CGAAGCGACGTTCTACGCCTGGCGCAAGAAGTATGCAGGGCTGATGCCGTCGGAGATGTG 221 Query 40094 GCGGCTAAAGCAGCTTGAGGACGAGAATGCCCGACTGAAGAAGATCGTGGCCGACCTGAC 40153 |||||| ||||||||||| ||||| ||| |||||| | | || || ||||||| Sbjct 222 GCGGCTGCGCCAGCTTGAGGAGGAGAACGCCAAGCTGAAGCGGTTGGTCGCTGACCTGAG 281 Query 40154 GCTCGACCGCGAGATGTTGAAGGACGTCATCCGCCGAAAACTCTGAGGCCTTTCCGGAAG 40213 |||||| | ||||||| |||| ||| || ||||| || |||||||| ||| Sbjct 282 CCTCGACAAGGCGATGTTGCAGGATGTCGTCTCGCGAAAGCTTTGAGGCCTGATCGGCGC 341 Query 40214 CGACAGCTCGTCGACG 40229 || ||||||||||||| Sbjct 342 CGGCAGCTCGTCGACG 357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128418588379800