Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq31280 486 1e-132 seq36028 315 5e-81 seq74161 123 2e-23 seq40411 87.8 1e-12 >seq31280 Length=10079 Score = 486 bits (538), Expect = 1e-132 Identities = 1106/1651 (67%), Gaps = 22/1651 (1%) Strand=Plus/Minus Query 9206 TACATCAAAGAATTCTATGATGCAGCGAGCACATTTGAAATCTCCCTCCCGACACCAATC 9265 |||||||| ||||| ||||| ||| ||| |||||||||| ||||| |||||| Sbjct 1787 TACATCAAGCGTTTCTACGATGCGATTTCCACGTTTAAAATCTCCCTGCCGACGCCAATC 1728 Query 9266 ATGTCTGGTGTTCGTACACCGACCCGCCAATTCAGCTCATGCGTAAAAATCGAAAGCGGT 9325 ||||| || || ||||| || ||||| || |||||||| || || || ||| | || Sbjct 1727 ATGTCGGGAGTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTCCTGATTGAATGTGGC 1668 Query 9326 GATAGCCTAAAATCAATCAATGCAACATCAGGCGCAATCGTGAGTTACGTTTCACAGCGT 9385 || ||||| | || ||||| || || || |||| || |||| ||||||||||| || Sbjct 1667 GACAGCCTGGATTCCATCAACGCGACCTCCAGCGCTATTGTGAAATACGTTTCACAACGC 1608 Query 9386 GCAGGTATTGGCATTAACGCGGGTCGTATCCGAGCATTAGGTTCTGAGATTCGTGGTGGT 9445 ||||||||||| |||||||||||||||||||| || | || |||||| || ||| Sbjct 1607 GCAGGTATTGGTATTAACGCGGGTCGTATCCGCGCGCTGGGCAGCCCGATTCGCGGCGGT 1548 Query 9446 GAAGCGGTACATACTGGTTGTATCCCATTCTACAAACACTTCCAAACAGCAGTGAAATGT 9505 ||||| | ||||| ||||||||||| |||||||| |||||||| ||||| ||||||| Sbjct 1547 GAAGCTTTCCATACCGGTTGTATCCCGTTCTACAAGCACTTCCAGACAGCGGTGAAATCC 1488 Query 9506 TGTAGCCAAGGCGGTGTTCGTGGCGGCGCGGCAACGGTATTCTACCCAATGTGGCACCTA 9565 ||| || ||||| || ||||||||||| || ||| | ||||| || |||||||| || Sbjct 1487 TGTTCGCAGGGCGGCGTCCGTGGCGGCGCAGCGACGCTGTTCTATCCGATGTGGCATCTG 1428 Query 9566 G-AGTACAAATCACTAATCGTACTCAAGAACAACCGTGGTATCGAAGAAAACCGTGTACG 9624 | |||| ||| | || | || || || |||||||||||| | |||| ||||| ||||| Sbjct 1427 GAAGTAGAAAGC-CTGTTAGTCCTGAAAAACAACCGTGGTGTGGAAGGTAACCGCGTACG 1369 Query 9625 TCATATGGACTACGGTGTACAAATTAATGGCCTGATGTATAAGCGTCTGCTGTCTGGTCA 9684 ||| |||||||||||||| || | || ||||||| |||| |||||| || | Sbjct 1368 TCACATGGACTACGGTGTGCAGCTCAACAAAATGATGTACCAGCGCCTGCTGAAGGGCGA 1309 Query 9685 GAACATCAC-TTTATTCTCACCTCATAGTGTACCGGGTCTATACGATGCATACTTCGAAG 9743 | ||||||| | || | | ||| | ||||| || || |||||||| | ||| | | Sbjct 1308 GGACATCACGCTGTTTAGCCCGTCAGA-CGTACCTGGCCTGTACGATGCGTTCTTTGCCG 1250 Query 9744 ACCAAGATAAGTTCGAGCGACTGTACACCAAAGCGGAATCTGA-TCCATCAATCGAAAAA 9802 | || || | || || || || ||||||||| ||| || || || ||| || Sbjct 1249 ATCAGGACGAATTTGAACGTCTTTACACCAAATACGAACAAGACAGCAGCATTCGTAA-- 1192 Query 9803 GACACAATCTCTGCTA-AGGAAG---CATTCAGCATACTAATGCAAGAGCGTGCTTCTAC 9858 || | || | || || ||| | | ||||| || || || ||||| Sbjct 1191 ---GCAGCGTGTGAAAGCGGTAGATCTGTTCTCGCTGATGATGCAGGAACGCGCCTCTAC 1135 Query 9859 AGGTCGCATCTACATTCAGCACGTAGATCACTGTAACATTAACGGTCCTTTCGATGAGCG 9918 || ||||||||||| ||| |||| || ||||| |||| || | || || || | | Sbjct 1134 CGGCCGCATCTACATCCAGAACGTTGACCACTGCAACACACACAGCCCGTTTGACGCCAG 1075 Query 9919 CGTTGCACCAGTACGCCAATCAAACCTATGTATGGAAATCGCACTACCAACCAAACCGTT 9978 |||| ||||| ||||| || ||||| ||| ||||||| || || ||||| |||||| | Sbjct 1074 TATTGCGCCAGTGCGCCAGTCGAACCTGTGTCTGGAAATTGCGCTGCCAACTAAACCGCT 1015 Query 9979 GAATAACGTCGATGATCCTGATGGTGAAGTTGCGCTATGTACTCTATCTGCATTCAACTT 10038 ||| ||||| | || | ||||| ||||||| ||||| || || ||||| ||| | Sbjct 1014 CAATGACGTCAACGACGAAAACGGTGAGATTGCGCTCTGTACGCTGTCAGCATTTAACCT 955 Query 10039 GGGTAAGATTGAATCGGTTGGTGATTTTGAGCGTCTGTCTCGTATCGTTGTGCGTGCATT 10098 ||| |||||| | | ||| | || ||| | | | ||| || || | Sbjct 954 TGGTGCGATTGACAGCCTGGACGATCTGGAAGAGCTGGCCACGCTGGCTGTACGCGCGCT 895 Query 10099 GGATAATCTGTTAGACTACCAAAACTACCCATTACCTGCCGCAGAACGTTCGACAATGCG 10158 |||| ||| | || || || | ||||| | || ||||| | || | ||| | Sbjct 894 GGATGCACTGCTGGATTATCAGGATTACCCGATTCCGGCCGCGCAGCGGGGTGCGATGGG 835 Query 10159 CAGACGTAGCCTTGGTGTAGGTATTATCAATTACGCCCACTGGGTGGCTAAGAATGGCCT 10218 | |||| || || | || | || || | || ||| |||| ||| | ||| | Sbjct 834 TCGTCGTACGCTGGGCATTGGCGTCATTAACTTTGCTTACTACCTGGCGAAGCACGGCGT 775 Query 10219 AAAATACAGTGACGGTAGCGCAAACAACAAGACGCATGAGCTGATTGAAGCTATGCAGTT 10278 ||| ||||| ||||| || | |||||| | ||||||| || |||| Sbjct 774 GCGCTACTCCGACGGCAGCGCGAATGGCCTGACGCACAAAACCTTTGAAGCCATTCAGTA 715 Query 10279 CTACTTGCTACAAGCATCAATGGAACTGGCTAAAGAGAAGGGTATGTGTTCTGGATTCGA 10338 |||| |||| |||| |||| || |||||||||||| | || || | | ||| | Sbjct 714 CTACCTGCTGAAAGCCTCAAATGAGCTGGCTAAAGAGCAAGGCGCCTGCCCGTGGTTCAA 655 Query 10339 AGACACTAAGTATGCCAAAGGTGTTATGCCAGTTGATCGTTATAAGTCTGATGTCGA--C 10396 || || | ||||| | || || |||| ||||| || ||| ||| | || | Sbjct 654 TGAAACCACCTATGCACAGGGCGTCCTGCCGATTGATACCTACAAGAAAGATCTGGATGC 595 Query 10397 AACACCCACACAGCAGAACTACAGATGAATTGGAATTGGTTGCGTAATGAGATTGTCCAT 10456 | || ||| | || || || | ||| | |||| | ||||| Sbjct 594 GATTTGCAACGAGCCG--CTGCACCTGGACTGGGAAACCCTGCGCGAGCAGATTAAAACC 537 Query 10457 AATGGCCTACGTAACTCTACTCTATCTGCATTCATGCCTTCGGAAACATCTTCTCAGGTA 10516 | ||||| || ||||| || || ||||| | ||||| || ||||| || || ||| | Sbjct 536 CACGGCCTGCGCAACTCGACGCTTTCTGCCCTGATGCCGTCTGAAACCTCGTCGCAGATT 477 Query 10517 TCTAACGCAACAAACGGCATCGAACCACCTCGTGGCTACATGTCAG--TTAAGCAGTCGA 10574 || ||||| || ||||| |||||||| || || ||| ||| |||| |||| ||| | Sbjct 476 TCAAACGCCACCAACGGTATCGAACCGCCGCGCGGC--CATATCAGTATTAAAGCGTCTA 419 Query 10575 AGGATGGCATCTTAAAACAAATCGTACCGGGTTATGATAAATACAAAGACCAATACGAGT 10634 | || || ||| | || | || |||| ||||| ||||| || ||||| Sbjct 418 AAGACGGTATCCTGCGTCAGGTGGTGCCGGAATATGAGCGTCTTAAAGATCAGTACGAAC 359 Query 10635 TACTATGGAATATCAAAGACAACACTGGTTACTTGGAATTGGTTGCCATCATGCAGAAGT 10694 | || ||| |||| ||| ||| ||| || || |||||| | | |||||||| | Sbjct 358 TGCTGTGGGATATGCCGTCCAATGATGGCTACCTGCAACTGGTTGGCGTAATGCAGAAAT 299 Query 10695 TTGTGGATCAGGCTATTTCAGCAAACACTAACTACGACCCAGAAAACTACCCAGAAAGTA 10754 | | |||||||| ||||| |||| || |||||||| || || ||| | | | Sbjct 298 TCATCGATCAGGCGATTTCGTCAAATACCAACTACGATCCGTCGCGCTTCCCGAATGGCA 239 Query 10755 AGGTTCCAATCAAAAAGTTATTGCAAGATTTGGTGACATGTTATAGACTCGGCATCAAGA 10814 | || || || || | | || ||||| || |||| || | | ||| | || | Sbjct 238 AAGTGCCGATGAAGCAACTGCTGAAAGATCTGCTGACCGCCTACAAGTTTGGCGTGAAAA 179 Query 10815 CACTGTACTACCACAACACACGAGATGGTGC 10845 | || |||||||| ||||| || |||||||| Sbjct 178 CGCTCTACTACCAAAACACCCGTGATGGTGC 148 >seq36028 Length=2231 Score = 315 bits (348), Expect = 5e-81 Identities = 639/948 (67%), Gaps = 37/948 (4%) Strand=Plus/Plus Query 11040 AGCAACTATCATTCTTCTGGCGTCCCGAAGAAGTTGATGTGTCACAAGACCGAATCGACT 11099 |||| || || |||||||||||||| |||||||| ||||| |||| || || ||||||| Sbjct 1 AGCAGCTTTCGTTCTTCTGGCGTCCTGAAGAAGTCGATGTCTCACGCGATCGCATCGACT 60 Query 11100 ACAGTAAAATGACTGATGCGGAGAAACACATCTTCATTAGTAACCTGAAGTACCAAACAT 11159 || || | ||| || || || |||||||| || |||||||| ||||| || | Sbjct 61 ACCAGGCCCTGCCCGATCATGAAAAGCATATCTTCATCAGCAACCTGAAATACCAGACGT 120 Query 11160 TACTCGACTCGATCCAAGGCCGTAGCCCGAATATGGCGTTCCTGCCTATTGTGTCACTAC 11219 |||| |||||||| || || || |||||||| |||| | ||||| | | || | | Sbjct 121 TACTGGACTCGATTCAGGGACGCAGCCCGAACGTGGCACTGCTGCCGCTGATCTCGATTC 180 Query 11220 CAGAAGTCGAAACTTGGGTAGAAACGTGGAGCTTCAGCGAAACCATCCACTCTCGTTCAT 11279 | ||| | ||||| ||| ||||||| ||| ||| |||||| ||||||||||| || | Sbjct 181 CGGAACTGGAAACCTGGATAGAAACCTGGGCGTTCTCCGAAACGATCCACTCTCGCTCGT 240 Query 11280 ACACACACATCATTCGCAATATTGTCAATGACCCTAGTATTGTGTTCGATGATGTTGTTG 11339 |||| |||||||||||||| || || || || || | | ||||| || ||| | || Sbjct 241 ACACCCACATCATTCGCAACATCGTGAACGATCCGTCTGTGGTGTTTGACGATATCGTCA 300 Query 11340 AGAATAAGCACATCCTAGAGCGAGCTAAAGATATTGCTCGTTACTACGACGATCTCAT-- 11397 || |||| || || | ||| || | || || || |||||||| || || || Sbjct 301 CCAACCAGCAGATTCTGGCGCGTGCGCAGGACATCTCTAAGTACTACGATGACCTGATTG 360 Query 11398 ------CT------TGGCAT-------GCAAAG---AGCATGAGCTAAACGGCAAACACA 11435 || |||||| | ||| |||| || | || || || || Sbjct 361 AGATGACTAACTACTGGCATTTGCTGGGTGAAGGTACGCATCAGGTCAATGGTAAGTCCA 420 Query 11436 CAA---------TGCGCGACCTAAAGAAAAAGTTGTACTTGTGCATGATGGCTGTTAATG 11486 | |||||| || || || ||||||| | ||| ||||| || |||| Sbjct 421 TTACGGTTAATGTGCGCGCGCTGAAAAAGCAGTTGTATATTTGCCTGATGAGCGTCAATG 480 Query 11487 TATTAGAAGCAGTTCGTTTCTACGTTAGTTTCGCTTGTTCATTTGCATTCGCTGAACGCG 11546 | ||||| | || |||||||| || || || || || ||||| || ||||| || | Sbjct 481 CGCTGGAAGCGATCCGCTTCTACGTCAGCTTTGCCTGCTCTTTTGCGTTTGCTGAGCGAG 540 Query 11547 AGATTATGGAAGGTAATGCTAAAATCATCAAGCTTATTGCTCGTGATGAAGCACTACACC 11606 | | |||||||| || || |||||||||||||| ||||| || || ||||| || |||| Sbjct 541 AACTGATGGAAGGCAACGCCAAAATCATCAAGCTGATTGCACGCGACGAAGCTCTGCACC 600 Query 11607 AAAGCGGTACACAGCACATGCTGAAGATGTGGAACAACGGCACCGATGATATGGAAATGG 11666 | ||| || |||||||||||||| || | || ||| || ||| |||||| Sbjct 601 TGACCGGCACCCAGCACATGCTGAATCTGCTGCGCACCGGTGAAGACGATCCTGAAATGA 660 Query 11667 CTTCTATCGCACATGAGTGTCGCGAAGAGTCAATCGAAATATTCAAGATGGCCGAAGAAC 11726 || || || || || ||||||| |||| | || |||| || | || Sbjct 661 AAGAAATTGCCGCCGAATGCCGTGAAGAGTGCTTCGAGCTGTTTAAGAAAGCGGCCTTAC 720 Query 11727 AAGAGAAAGACTGGGCAAACTATCTATTCAAAGATGGTGGTATGATCGGACTAAACAAAG 11786 | |||||||| |||||| | || || |||| | || |||||||| || ||||||| Sbjct 721 AGGAGAAAGAGTGGGCAGATTACCTGTTCAGCGGCGGCTCCATGATCGGTCTGAACAAAG 780 Query 11787 ATATTCTATGTGAATATGTTGAGTACATCACAAGCCACCGAATGAAGTATGTCGGGCTAC 11846 |||| || || | ||| | || |||||||| | | || ||| || || || || Sbjct 781 ATATCCTGTGCCAGTATATCGAATACATCACCAACATTCGTATGCAGGCGGTTGGCCTCG 840 Query 11847 CTCCGCTACACCCGGAA-GC-AACTAACCCAATCCCATGGATCAACAACTGGTTGGTTAG 11904 || || | || || || | ||||| || || ||||||||| |||| |||| Sbjct 841 ATCTGC--CGTTCGAAACGCGCTCGAACCCGATTCCCTGGATCAACGCCTGGCTGGTGTC 898 Query 11905 TGATAATGTTCAAGTTGCTCCACAGGAAGCCGAGATTAGTTCATACCT 11952 ||||| ||||| ||||| || ||||||| || | ||||| ||||| Sbjct 899 CGATAACGTTCAGGTTGCCCCGCAGGAAGTGGAAGTCAGTTCTTACCT 946 >seq74161 Length=667 Score = 123 bits (136), Expect = 2e-23 Identities = 132/168 (79%), Gaps = 11/168 (7%) Strand=Plus/Plus Query 10913 ATGAATTATTCAGTATTTAACCAAACAAAAAACGAC-CAAC---TGAAGGAGCCGATGTT 10968 ||||||||||| |||||| || | |||| | ||| |||| |||| || ||||| Sbjct 105 ATGAATTATTCTACATTTAATCAGAAAAAATA-GACGCAACCCTTGAA----CCAATGTT 159 Query 10969 CTTCGGCCAATCAGTTAACGTATCCCGTTACGACCAACAGAAACATGATGTTTTTGAGAA 11028 || ||| ||||||| |||||||||||||| ||| | || ||| || || |||| ||||| Sbjct 160 -TTGGGCGAATCAGTAAACGTATCCCGTTATGACAAGCAAAAATATAATATTTT-GAGAA 217 Query 11029 ACTAACTCAGAAGCAACTATCATTCTTCTGGCGTCCCGAAGAAGTTGA 11076 |||| | | |||||| ||||||||||||||||||| |||||| |||| Sbjct 218 GCTAATTGAAAAGCAATTATCATTCTTCTGGCGTCCAGAAGAAATTGA 265 >seq40411 Length=1793 Score = 87.8 bits (96), Expect = 1e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 8077 ACACCATCCGAAAGTCTATGTGACCGTTTCTGTCGTATCGATGCTGAAGCATTTGGAATC 8136 ||||| ||||| |||||||||||||||| || | ||||| | | |||||| | Sbjct 448 ACACCCAGCGAAAACTTATGTGACCGTTTCTGCCGACTGGATGCGGCTGAATTTGGTGTG 507 Query 8137 ATTGAGGGGGTGACAGATCGAGATTATTACACAAATAGTTTCCATTTGGATGTTGAGAAG 8196 | | || ||||| || || ||||||||| || || |||||| |||| ||||||||| Sbjct 508 GTAAAAGGCGTGACCGACAAAGGTTATTACACCAACAGCTTCCATCTGGACGTTGAGAAG 567 Query 8197 CGTGTTAGTCCTATGGCTAAAATCGACTTTGAAGCACCATA 8237 || | |||| | |||||||| |||||||| || || Sbjct 568 AAGGTGAATCCTTACGAAAAAATCGATTTTGAAGCTCCCTA 608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342428148475700