Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq2641 98.7 2e-15 >seq2641 Length=263 Score = 98.7 bits (108), Expect = 2e-15 Identities = 148/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||| || | || | ||| | ||||| ||||| || || ||||| Sbjct 249 ATTCCACCACGAAGTCGAAGAACCAGATGCAGAGTAGATTCTTTCTGAATGTTGTAATCG 190 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | ||||| |||| ||||| || |||||||||||||| | || |||||||| || Sbjct 189 GCAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAGATGAGTCGTTGTTGATCGGGG 130 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || ||||| | ||| |||| ||||| |||| ||| || ||||| Sbjct 129 GGAATACCCTCCTTGTCTTG-AATTTGGTTTTGACATTGTCGATAGTATCCGAAGATTCA 71 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAA 192515 ||||| || || || || || || || || Sbjct 70 ACTTCAAGGGTGATAGTCTTGCCGGTCAA 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982836441405000