Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq22478 233 1e-56 seq56393 199 2e-46 seq38326 168 3e-37 seq56368 154 8e-33 seq2902 123 1e-23 seq75989 116 2e-21 seq51529 98.7 5e-16 seq34909 91.5 8e-14 seq37656 86.0 3e-12 seq63933 84.2 1e-11 >seq22478 Length=2302 Score = 233 bits (258), Expect = 1e-56 Identities = 378/540 (70%), Gaps = 8/540 (1%) Strand=Plus/Plus Query 59668 TACCAGGGTGACGATCCGCTGAAGCGGAAGGTGGCCT-CGACGTTGCTGGAGGGGTTCCT 59726 |||| | |||||||||| | ||| || | ||| || | || |||||| ||| || Sbjct 5 TACCGCGCTGACGATCCGTTAAAGAAAAAAATCGCCAGCGTCTTT-CTGGAGTCGTTTCT 63 Query 59727 GTTCTACTCGGGCTTCTACCTGCCGATGTACTGGTCTAGTCGGGGGAAGCTGACGAACAC 59786 ||| || |||||||||| ||||||||||||||||| || || || |||||||| || || Sbjct 64 GTTTTATTCGGGCTTCTGGCTGCCGATGTACTGGTCCAGCCGCGGCAAGCTGACCAATAC 123 Query 59787 GGCCGACATGATCCGGCTCATCATTCGTGACGAGGCGGTGCACGGCTACTACATCGGATA 59846 ||| || |||| || | ||||| || || |||||||| ||||||||||| ||||| || Sbjct 124 GGCGGATCTGATTCGTTTAATCATCCGCGATGAGGCGGTACACGGCTACTATATCGGCTA 183 Query 59847 CAAGTTCCAGCGCGGCCTGGAGACTCAG---AACGAGGCTCGCCGCGAGGAGCTGAAGGA 59903 || | |||| | || ||| ||| | |||| |||||||| | | || | Sbjct 184 TAAATACCAGAAAGCGCTTGAG---CAGGTCGATGAGGGCCGCCGCGAAGCCTTACAGCA 240 Query 59904 CTACACGTACGGTCTGCTACTCGAGTTGTACGACAACGAGATTGAGTACACGCAGGATCT 59963 | | | || |||||| || | | |||| || || || | | || || | | || Sbjct 241 GTTCGCCATCGATCTGCTGCTGGCGCTGTATGAAAATGAAGTGGCCTATACAGAAGCGCT 300 Query 59964 GTACGACGGCGTGGGACTGACTGAGGATGTCAAGATGTTCCTGCGCTACAACGCCAACAA 60023 ||||| || || | | || || || || | ||||||| ||||||||||| || Sbjct 301 GTACGGCGAAACAGGCTGGGCAGACGAGGTGAAAACCTTCCTGCATTACAACGCCAATAA 360 Query 60024 GGCGCTGATGAATCTCGGCTACGAGGCGCTGTTCCCGCGCGACGAAACCGAGGTGAATGC 60083 ||| |||||||||| ||||||||||| ||||||||| || || |||| ||| | Sbjct 361 AGCGTTGATGAATCTGGGCTACGAGGCTCTGTTCCCGGCGGAGCTGACGCAGGTCAATCC 420 Query 60084 GGCGATCTTGGCGGCACTGTCCCCTGGCGGGGACGAGAACCACGACTTCTTCTCGGGCTC 60143 ||| || ||||||||||||| || | ||| |||||||| || |||||||||||||| Sbjct 421 GGCCATTCTGGCGGCACTGTCACCCAATGCGGATGAGAACCATGATTTCTTCTCGGGCTC 480 Query 60144 TGGCAGCACGTATGTGATTGGCAAGGCTGAGGTTACGGAAGACGAGGATTGGGACTTCTA 60203 || | || ||||| || || || | | || |||||||| || ||| | || || Sbjct 481 AGGATCGTCTTACGTGATGGGGAAAGCGGTCGAAACCGAAGACGAAGACTGGAATTTTTA 540 >seq56393 Length=430 Score = 199 bits (220), Expect = 2e-46 Identities = 214/278 (77%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 59926 GAGTTGTACGACAACGAGATTGAG-TACACGCAGGATCTGTACGACGGCGTGGGACTGAC 59984 ||| | || |||||||| | | | ||||| | | || ||||| ||||| || ||||| Sbjct 428 GAGCTCTATGACAACGA-AGCGCGATACACCGAAGCGCTTTACGATGGCGTCGGCCTGAC 370 Query 59985 TGAGGATGTCAAGATGTTCCTGCGCTACAACGCCAACAAGGCGCTGATGAATCTCGGCTA 60044 ||||| ||||||| |||||||| |||||| |||||||||||||||||||| |||||||| Sbjct 369 CGAGGACGTCAAGAAGTTCCTGCACTACAATGCCAACAAGGCGCTGATGAACCTCGGCTA 310 Query 60045 CGAGGCGCTGTTCCCGCGCGACGAAACCGAGGTGAATGCGGCGATCTTGGCGGCACTGTC 60104 |||||| ||||| |||| || | | |||| ||| |||| ||| | |||| ||||| Sbjct 309 CGAGGCACTGTT-CCGC-CGGAGGCTGCAAGGTCAATCCGGCCATCCTTTCGGCGCTGTC 252 Query 60105 CCCTGGCGGGGACGAGAACCACGACTTCTTCTCGGGCTCTGGCAGCACGTATGTGATTGG 60164 || | || |||||||||||||||||||| ||||| || | ||||| || || Sbjct 251 GCCCAATGCCGATGAGAACCACGACTTCTTCTCCGGCTCGGGTTCGTCCTATGTCATCGG 192 Query 60165 CAAGGCTGAGGTTACGGAAGACGAGGATTGGGACTTCT 60202 |||||| | | ||| ||||||||||||||||| |||| Sbjct 191 CAAGGCGGTGAGTACCGAAGACGAGGATTGGGATTTCT 154 >seq38326 Length=251 Score = 168 bits (186), Expect = 3e-37 Identities = 184/243 (76%), Gaps = 6/243 (2%) Strand=Plus/Plus Query 59311 TGGAACCGGTTGACCAACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATC 59370 ||||| || ||||| ||||||||||||||| || |||||||| | |||||||||||| Sbjct 2 TGGAATCGCCTGACCGGCAACTTCTGGCTGCCGGAAAAGATCCCGCTGTCCAACGACATC 61 Query 59371 CCGGCCTGGGGCACGCTGACG---GAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACC 59427 || |||||| || |||||| ||||| |||| || || || || ||||||||| Sbjct 62 CCCTCCTGGGCGACCCTGACGCCCAAGGAACAGCA---GCTGACCATCCGCGTCTTCACC 118 Query 59428 GGCCTGACGATGCTCGACACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGAC 59487 |||||||| |||| ||||| |||||| | ||||||| || || || | | || Sbjct 119 GGCCTGACCCTGCTGGACACCATCCAGAACGCCGTGGGCGCCCCGACGCTACTGGCCGAT 178 Query 59488 GCGATCACGCCGCACGAGGAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCAC 59547 || ||||||| |||||||| |||||| | | ||||||| ||||||||| ||||||| Sbjct 179 GCCGTCACGCCCCACGAGGAAGCGGTGATCGCCAACATCGGCTTCATGGAGGCGGTGCAT 238 Query 59548 GCG 59550 ||| Sbjct 239 GCG 241 >seq56368 Length=283 Score = 154 bits (170), Expect = 8e-33 Identities = 186/251 (74%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 59884 CGCCGCGAGGAGCTGAAGGACTACACGTACGGTCTGCTACTCGAGTTGTACGACAACGAG 59943 |||||| || || | ||||||| | | |||| ||||| | || | || ||||||||| Sbjct 34 CGCCGCCAGCAGGTCAAGGACTTCGCCTACGAGCTGCTGCAGGACCTCTATGACAACGAG 93 Query 59944 ATTGAGTACACGCAGGATCTGTACGACGGCGTGGGACTGACTGAGGATGTCAAGATG--T 60001 | | ||||| || | || |||||| ||||||| || ||||| || |||| | Sbjct 94 GTGGCCTACACCGAG-ACCTCTACGACAGCGTGGGCTGGAGCGAGGACGTGAAGAGAAAT 152 Query 60002 TCCTGCGCTACAACGCCAACAAGGCGCTGATGAATCTCGGCTACGAGGCGCTGTTCCCGC 60061 |||| | ||||||||||||||||||||||||||| || |||| ||| || |||||||| Sbjct 153 TCCTTCACTACAACGCCAACAAGGCGCTGATGAACCTGGGCTTCGAAGCCCTGTTCCCCA 212 Query 60062 GCGACGAAACCGAGGTGAATGCGGCGATCTTGGCGGCACTGTCCCCTGGCGGGGACGAGA 60121 || | ||||| || | |||||||| | || || ||||| || ||| ||||||| Sbjct 213 GCAGCATGACCGACGTCAGCCCGGCGATCCTCGCCGCCCTGTCGCCCAGCGCCGACGAGA 272 Query 60122 ACCACGACTTC 60132 ||||||||||| Sbjct 273 ACCACGACTTC 283 >seq2902 Length=689 Score = 123 bits (136), Expect = 1e-23 Identities = 349/528 (66%), Gaps = 46/528 (9%) Strand=Plus/Plus Query 62055 GCAGCTGGGATCTCTCGGCGGCGGCAACCACTTCATCGAGTTGTGTGTCGACGCCGAGGA 62114 ||||||||| | |||||| |||||||||||| ||||| ||| ||||| | Sbjct 191 GCAGCTGGGCACCCTCGGCTCGGGCAACCACTTCGTCGAGGTGTCCTCCGACGAGCTCGG 250 Query 62115 CAACGTGTGGCTGTTCCTGCACTCCGGTTCTCGCGGAGTCGGCAACAAGATCGCGCAGCG 62174 | |||||||||||||| |||||||| || ||||| || || ||| || | |||||||| Sbjct 251 CCGGGTGTGGCTGTTCCTCCACTCCGGCTCGCGCGGGGTGGGGAACCAGCTGGCGCAGCG 310 Query 62175 CCACATCAAGGCGGCTGTGGAGTACTGCGCAGAGGGTGCGCGGCTGGCTGGCTCCGATTC 62234 |||||| ||| || ||||| || || ||| ||| | | | Sbjct 311 GCACATC----CGGGTG---------GCGCA---GGAGC-AGGC-----GGCACGG---C 345 Query 62235 GGTTCGCGCCCGCTACCGACTCCCTCACCGAGATCTCGCGTTCCTGGACGAGGGAACGTG 62294 |||| ||| || || |||| || ||||| | ||| | ||||| | Sbjct 346 GGTT--------TTACGACCTGCCGGACCGCGACCTCGCCTACCTCGTGGAGGGGGAGCC 397 Query 62295 GATGTTCGACACGTACATCAAGGAGCTGGAGTGGGCCCAGCGGTTCGCGTACCTGAACCG 62354 | ||||||| | ||| || ||| || |||||| ||||| ||||| ||| ||||| Sbjct 398 GGAGTTCGACGCCTACGTCGAGGCCCTCCTGTGGGCGCAGCGCTTCGCCGCCCTCAACCG 457 Query 62355 TGCGGAGATGATGGACCGCTTCGTCCAGGTGTTCGCGTGGTGGATGGGC---GTCGAGGC 62411 | |||||||||||||||| ||||| | | |||| | | ||| | || | | Sbjct 458 CGAGGAGATGATGGACCGCGTCGTCGCCGCGCTCGCCGAGGCCCTCGGCCTGGGCGGGCC 517 Query 62412 TCAG--CGT-GTCGAGGTGGAGCGCATCAACTGCCACCACAACTACACGGTCCCCACCGT 62468 || ||| ||| | |||| ||| |||||||||||||||||| | || || Sbjct 518 GGAGGACGTCGTCCGCGAGGAGACGATCGGCTGCCACCACAACTACAC---CGCCCGCGA 574 Query 62469 GATCGAC--GGGGAGCGA-GTGTGGTTGACCCGCAAGGGGGCAATCGACGCGACCGAGGG 62525 || | || ||| | || |||||| || ||||||| || || ||| ||| |||||| Sbjct 575 GACCCACTACGGGCGTGAGGTGTGGCTGTCCCGCAA-GGCGCCATCAGCGCCCGCGAGGG 633 Query 62526 CAAGCTGGGCGTGATCCCGGGCTCGATGGGCACCCGGTCGTACGTGGT 62573 | |||| ||| | | ||||| ||||||||| | ||| ||||| || Sbjct 634 CGAGCTCGGCCTCGTGCCGGGGTCGATGGGCGACGCGTCCTACGTCGT 681 >seq75989 Length=485 Score = 116 bits (128), Expect = 2e-21 Identities = 116/149 (78%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 61686 CGCGGAGATGCCGTTCATCTACCCGCACCTGGCGCTGATGCCGGATGCCCACTCGGGCAA 61745 |||| ||||||||||||||| | |||||||||| ||||||| || | || |||||| Sbjct 269 CGCGAAGATGCCGTTCATCTTCAAGCACCTGGCGGTGATGCCCGACGTGCATCTGGGCAA 210 Query 61746 GGGATCTGCGGTCGGCACCGTCATCCCCACCAAGGGCGCTGTCATTCCGGCCGCTGTTGG 61805 ||| || | |||||| ||| |||||| | |||||| |||| || || || | ||| Sbjct 209 GGGCTCGACCATCGGCAGCGTGATCCCCTCGGTGGGCGCGATCATCCCTGCTGCCG-TGG 151 Query 61806 GGTGGACATCGGCTGCGGCATGATTGCCG 61834 ||||||||||||||||| ||||| |||| Sbjct 150 CGTGGACATCGGCTGCGGGATGATCGCCG 122 >seq51529 Length=714 Score = 98.7 bits (108), Expect = 5e-16 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 || |||||||||||||| | ||||| ||||| || ||| ||||||||||| | ||| Sbjct 596 GCGATCAACTGGAACCGTCTGCAGGACGAGAAGGACCTGGAGATCTGGAACCGGCTCACC 655 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGAC 59367 | ||||||||||||||| |||||| |||| | ||||||||| Sbjct 656 AGCAACTTCTGGCTGCCGGAGAAGGTCCCGCTGTCCAACGAC 697 >seq34909 Length=2663 Score = 91.5 bits (100), Expect = 8e-14 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 || || ||||||||||| | || || || |||||||||||||||||||| |||| Sbjct 2517 GCGATTAACTGGAACCGGATTCAGGATGAGAAAGATCTTGAGGTCTGGAACCGTCTGACA 2576 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 | |||||||||| |||| || || ||||| | ||||| || | ||||||||| ||| Sbjct 2577 AGCAACTTCTGGTTGCCGGAAAAAATCCCGCTGTCCAATGATTTGCCGGCCTGGCAGACG 2636 Query 59386 CTG 59388 ||| Sbjct 2637 CTG 2639 >seq37656 Length=523 Score = 86.0 bits (94), Expect = 3e-12 Identities = 92/119 (77%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 62049 GATGGAGCAGCTGGGATCTCTCGGCGGCGGCAACCACTTCATCGAGTTGTGTGTCGACGC 62108 ||||| ||||||||| | | ||||| |||||||||||||||||| |||| |||||| Sbjct 367 GATGG-GCAGCTGGGCACGTTGGGCGGTGGCAACCACTTCATCGAGCTGTGCCTCGACGA 309 Query 62109 CGAGGACAACGTGTGGCTGTTCCTGCACTCCGGTTCTCGCGGAGTCGGCAACAAGATCG 62167 |||| |||||| || | ||||||| ||| || ||||| |||||||| ||||| Sbjct 308 AGAGGCGCGGGTGTGGGTGATGCTGCACT-CGGGTCGCGCGGCGTCGGCAATGCGATCG 251 >seq63933 Length=285 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 59407 CTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGACACGATCCAGGGCACCGTGGGT 59466 ||||| || || ||||| ||||||||||| |||| ||||| || ||| |||| Sbjct 12 CTCACCATTCGCGTCTTTACCGGCCTGACACTGCTGGACACCATTCAGAATGTGCTGGGC 71 Query 59467 GCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGAGGAGGCGGTGTACACGAACATC 59526 || | | | || ||||||||| | |||||||| |||||||||||| |||| ||| Sbjct 72 GCACCGGGGTTAATGCCTGACGCGCTGACGCCGCATGAGGAGGCGGTGCTGTCGAATATC 131 Query 59527 GCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAACATCTTCTCGACGCTGTGCTCG 59586 || |||||| ||||||| || ||||||| || || ||||| | || Sbjct 132 AGCTTTATGGAGGCGGTGCATGCCCGCTCCTACAGCTCGATTTTTTCGACCTTATGTAAT 191 Query 59587 TCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGGAGAATCCGAACCTGCAA 59640 ||| || | || ||||||| || ||| || ||||| | | ||||||| Sbjct 192 ACCAGCGATGTGGATGCGGCGTACCAGTGGAGCGAAGAGAACCAGGCCCTGCAA 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258520009162800