Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_021302.1 Length=47109 Score E Sequences producing significant alignments: (Bits) Value seq77134 127 6e-25 seq27079 80.6 8e-11 >seq77134 Length=829 Score = 127 bits (140), Expect = 6e-25 Identities = 122/154 (79%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 38028 GGCTGAGTGTCTGCGTGTGTTGAAACCGGGCGGGCACATGTTGGCGTTCGGCGGTTCGCG 38087 ||||||||| ||||| ||| | || || ||||| ||| || ||||||| | ||| | || Sbjct 557 GGCTGAGTGCCTGCGCGTGCTCAAGCCTGGCGGCCACCTGCTGGCGTTTGCCGGCACCCG 616 Query 38088 CACCTGGCACCGGCTGGCGG-CGGCGATCGAGGACGCCGGGTTCGAGGTCCGCGACTCGA 38146 |||| |||||| |||| | | || ||||||||||||||||||||| |||||||| || Sbjct 617 CACCCAGCACCGCATGGCCGTCCGC-ATCGAGGACGCCGGGTTCGAGATCCGCGACATGA 675 Query 38147 TCGCCTGGCTGTACGGATCCGGGTTCCCGAAGTC 38180 |||||||| | ||||| || ||| | || ||||| Sbjct 676 TCGCCTGGGTTTACGGGTCTGGGATGCCTAAGTC 709 >seq27079 Length=4003 Score = 80.6 bits (88), Expect = 8e-11 Identities = 98/134 (73%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 38347 CAGTGGCAGGGCTGGGGCACGGCACTGAAACCGGCGTTCGAGCCGATCGTGGTCGCGCGT 38406 || ||| | ||||||||||| || | ||||| ||| |||||| ||| || || ||| Sbjct 1145 CAATGGGAAGGCTGGGGCACTGCCTTAAAACCCGCGCACGAGCCTATCTGCGTTGCCCGT 1204 Query 38407 AAACCGCTGGCGGGCACCGTGGCTGCGAATGTGCTCGGGCACGGCACCGGCGCGCTCAAC 38466 |||||||||||||| || || || || || || | |||||||| |||| | | || Sbjct 1205 AAACCGCTGGCGGGTACTGTCGCAAGTAACGTACTGGCACACGGCACAGGCGGGTTAAAT 1264 Query 38467 ATCGACGCCTGCCG 38480 || |||| ||||| Sbjct 1265 ATAGACGGATGCCG 1278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150394132650600