Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_021346.1 Length=157482 Score E Sequences producing significant alignments: (Bits) Value seq8276 93.3 4e-14 seq54514 86.0 6e-12 >seq8276 Length=3740 Score = 93.3 bits (102), Expect = 4e-14 Identities = 113/153 (74%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 116564 TGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGC 116623 |||| || |||||| ||||| ||||| | | ||||| |||||| ||||||| | Sbjct 811 TGCCGGT-CGGCCCCGGCCGGGGCTCGGGTGCCGGCTCCCTGGTCGCCTACGTACTCAAG 753 Query 116624 ATCACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGAC 116683 |||||| |||| ||| | || |||||| |||||||||||||| ||||||| || Sbjct 752 ATCACCGACCTCGATCCGCTGGCCTATGACCTGCTGTTCGAGCGCTTCCTCAACCCCGAA 693 Query 116684 CGCCCCGACTTCCCCGACATCGACGTCGACTTC 116716 || | | | |||||| |||||||||||||| Sbjct 692 CGGATCTCCATGCCCGACTTCGACGTCGACTTC 660 >seq54514 Length=408 Score = 86.0 bits (94), Expect = 6e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 93378 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGTTGTCGCAGGTTCGAA 93437 |||||||||| ||||| ||| |||||||| ||| ||||| || |||||||||||||| Sbjct 292 CGGGGTGTAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGCAGGTTCGAA 351 Query 93438 TCCTGTCACCCCGAC 93452 ||||||| ||||||| Sbjct 352 TCCTGTCTCCCCGAC 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502993812296000