Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_021772.1 Length=72394 Score E Sequences producing significant alignments: (Bits) Value seq40687 104 1e-17 seq38457 102 4e-17 seq34527 93.3 2e-14 seq99145 91.5 7e-14 seq58026 89.7 2e-13 >seq40687 Length=4650 Score = 104 bits (114), Expect = 1e-17 Identities = 126/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 12412 AACCAAGTTAATTGAAACTGGTTTGGCTATTCATCTGGACGATGTACATGTAGCTGCAAT 12471 ||||| |||||| || ||| |||||||||| | | |||| | | || || | Sbjct 2365 AACCACATTAATTCCTACCGGTCTGGCTATTCACATCGCCGATCCGAACCTTGCCGCCGT 2424 Query 12472 GATTCTTCCTCGTTCAGGTCTAGGCCATAAACATGGTGTAGTGCTTGGGAACCTTACTGG 12531 ||||||||| || || || || ||||| ||||||||| | || || || || || ||| Sbjct 2425 GATTCTTCCGCGCTCTGGCCTGGGCCACAAACATGGTATTGTCCTGGGTAATCTGGTTGG 2484 Query 12532 TCTGATTGATTCAGATTATCAGGGTGAACTTATGGTAAGCCTCTGGAATCGC 12583 |||||||||| | || |||||||| ||||||||||| | ||||||||| Sbjct 2485 TCTGATTGATGCCGACTATCAGGGACAACTTATGGTATCGGTATGGAATCGC 2536 >seq38457 Length=3703 Score = 102 bits (112), Expect = 4e-17 Identities = 133/179 (74%), Gaps = 9/179 (5%) Strand=Plus/Plus Query 69678 GTACTCTTT--GATAGTTTTCGTATGCGATTATGCGGTTTTTTAGAAACGAACCATAAAA 69735 || |||||| |||||||||||||||||| | ||||| |||||||||||| |||| |||| Sbjct 2837 GTGCTCTTTCCGATAGTTTTCGTATGCGACTTTGCGGGTTTTTAGAAACGGACCACAAAA 2896 Query 69736 CATAAATGCAAACGATGATGTTGTTCTGATGGCGGCTTAACAGCCTATAAATCAGTGA-G 69794 |||||||||||||| || || | || || |||| ||| | | | | | Sbjct 2897 AGTAAATGCAAACGATAGTGAGTTTAAAGTAGCAGCCTAACGGCC-AACGCGCTTTCATG 2955 Query 69795 GTATTCCAGTTCCTCATAACAAAATATGGCGCACT--GGCCC---GGTGTGATTAATAA 69848 ||||||||||||| |||| ||| ||||||| | ||||| | |||||||||||| Sbjct 2956 GTATTCCAGTTCCATGTAACCGAATCTGGCGCATTGCGGCCCTGAGATGTGATTAATAA 3014 >seq34527 Length=8391 Score = 93.3 bits (102), Expect = 2e-14 Identities = 131/179 (73%), Gaps = 9/179 (5%) Strand=Plus/Plus Query 69678 GTACTCTTT--GATAGTTTTCGTATGCGATTATGCGGTTTTTTAGAAACGAACCATAAAA 69735 || |||||| |||||||||||||||||| | ||||| |||||||||||| |||| |||| Sbjct 3080 GTGCTCTTTCCGATAGTTTTCGTATGCGACTTTGCGGGTTTTTAGAAACGGACCACAAAA 3139 Query 69736 CATAAATGCAAACGATGATGTTGTTCTGATGGCGGCTTAACAGCCTATAAATCAGTGA-G 69794 ||||||||||| || || || | || || |||| ||| | | | | | Sbjct 3140 AGTAAATGCAAACAATAGTGAGTTTAAAGTAGCAGCCTAACGGCC-AACGCGCTTTCATG 3198 Query 69795 GTATTCCAGTTCCTCATAACAAAATATGGCGCACT--GGCCC---GGTGTGATTAATAA 69848 ||||||||||||| |||| ||| |||| || | ||||| | |||||||||||| Sbjct 3199 GTATTCCAGTTCCATGTAACCGAATCTGGCACATTGCGGCCCTGAGATGTGATTAATAA 3257 >seq99145 Length=730 Score = 91.5 bits (100), Expect = 7e-14 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 67659 TGGAAGATTCCGCTCAGTGGTGGGCAATCCGGTTTGAACCCGGAGGTGCTGGTAACGGTA 67718 |||||| |||||| |||||| |||||||||||||||||||||||| | | || || | Sbjct 468 TGGAAGGCTCCGCTAAGTGGTTGGCAATCCGGTTTGAACCCGGAGGGGTCCGAAAGGGCA 409 Query 67719 GGGGTTCGACTCCTCAATCTTCCGCCAA 67746 ||||||| |||||||| ||||||||| Sbjct 408 GGGGTTCAACTCCTCAGCTTTCCGCCAA 381 >seq58026 Length=2478 Score = 89.7 bits (98), Expect = 2e-13 Identities = 188/278 (68%), Gaps = 12/278 (4%) Strand=Plus/Plus Query 11927 CGTTTTGCCAATATGGATAAACGTATTGATGAGAATCGTAAAAATGCATCTGCTGGTATT 11986 ||||| ||| ||||||| | | || | || || ||||| ||| ||||||| || Sbjct 738 CGTTTCTCCAGTATGGATCAGCAAATCGGGGAAAACCGTAAGCTTGCCAGTGCTGGTGTT 797 Query 11987 GCAGGCGTAGCTGCTATGGCTAACATTCCACAGGTAAGCCAGAATAGTTCATTCTCAGTT 12046 || || | ||||| ||||| |||||||| |||||| ||||| ||| | || || Sbjct 798 GCTGGTGCGGCTGCAATGGCAAACATTCCCCAGGTATCGCAGAACAGTACCTTTAGCGTC 857 Query 12047 GGTGCTGGGGTAGGTTCATATGATAGTGAACAAGGTCTTGCTGTTGGTATGAGTGCTCGT 12106 |||||||| ||||| || |||||| || | | | || || || | ||||||||| Sbjct 858 GGTGCTGGCGTAGGAGACTACGATAGTCAAAACGCCGTGGCAGTAGGGTTCAGTGCTCGT 917 Query 12107 TTTAACGAGAATATAGTAACCAAAGCTTCAGTAGCTGC---CACTA-CTCAAGAT--GAT 12160 |||| | ||||| || ||||||| || |||| ||| | |||| || || Sbjct 918 ATTAATGGTAATATCGTTACCAAAG------TATCTGCAAGCACGAACTCAGCATCTGAA 971 Query 12161 TTCGTCTTTGGTGCTGGTGTAAGCTACGAGTGGTAATT 12198 | | | ||||| || | |||| ||||||||||| Sbjct 972 ATGCTTTGGGGTGCAGGGGCAAGCGTTGAGTGGTAATT 1009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231168313596500