Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_021779.1 Length=59746 Score E Sequences producing significant alignments: (Bits) Value seq40328 205 4e-48 seq60383 174 6e-39 seq76547 122 3e-23 seq98424 116 1e-21 seq129722 91.5 6e-14 >seq40328 Length=627 Score = 205 bits (226), Expect = 4e-48 Identities = 397/581 (68%), Gaps = 4/581 (1%) Strand=Plus/Plus Query 42485 TTCCCGTAATGCGGCGGGATGTTGAGTTTGAACGGCATGGCATCCCAATAGTCGTTCACG 42544 || |||||||| | ||||| || |||||||| ||||| ||||||||| | || || || Sbjct 33 TTTCCGTAATGAGAGGGGATATTCAGTTTGAATGGCATTGCATCCCAAAAATCATTTACA 92 Query 42545 TCCTGCTTATCGAAACTCCCCCAATGGCAAAGGGGGTACACCAGATTGAATTTCTTGGCC 42604 ||||||||||| ||| ||||| || || | || || |||| ||| || ||| | Sbjct 93 TCCTGCTTATCAAAAGAACCCCAGTGACACAATGGATATACCAAGTTGTATCGCTTAGTG 152 Query 42605 GACGCTTTGTTCGGGTCAGCCCGCTCCGGCTCGTCAGCCCGCATTCCGATGGCCGTCTTC 42664 ||||| || | | | || ||||| ||||||||||| ||||| || || || || || Sbjct 153 GACGCCTTATCCATTGCTGCGCGCTCGGGCTCGTCAGCGCGCATGCCTATTGCGGTTTTG 212 Query 42665 GCACTCCATCCACGGCGCGCCAGCCCATTGCTGCGCATCCAGTGGCGGATTGTCTGCGTT 42724 ||| ||| ||| | | || || || |||||||| | |||||| || || Sbjct 213 GCAGACCAGCCATGCCTGGCTAGGTTGTTAGCCCGCATCCATGATCTGATTGTTTGAGTC 272 Query 42725 TTCAGGTAGTCGCTGCACTTCTGGCGCGATATGTTCGGGATGCCCTCGACGCTGATCAGG 42784 || | || || ||||| ||||| || |||| ||| || || || ||||| || || || Sbjct 273 TTTAAATAATCACTGCATTTCTGACGGGATACGTTAGGTATTCCTTCGACACTTAT-AGT 331 Query 42785 CTTTCAAACGGTTCGCCGTTCCGCGCGGCCGTCTCGAAACTGACGACCCGGTGGCGCATC 42844 |||||| || |||||||||| || || || || || |||| | ||| ||| Sbjct 332 TGTTCAAATGGCTCGCCGTTCCTCGATGCTGTTTC-AATGTGACTATTTTGTGTGACATA 390 Query 42845 CCGACACCATGTTCCGGACTGGCGTAGCCTTCCAGCCACACCAGATTCAGGCCGAAGTGT 42904 || ||||| || || || || | |||||| ||||| |||||||| ||||| || || Sbjct 391 CCAACACCGTGCTCGGGGCTTGTTACGCCTTCAAGCCAAACCAGATTAAGGCCAAAAAGT 450 Query 42905 TTATCCACCTTGTCGGCGAATATCAGTGTTTCTTCGTGCTCCCGGCCAGTATTGGCGAAC 42964 ||||| ||||| || || || || | ||||| || || ||||| || || || || Sbjct 451 TTATCGACCTTATCAGC-AAAATTAAAGTTTCGGGATGTTCGCGGCCCGTGTTCGC-AAA 508 Query 42965 ACGAAACGCAGGTCATATTTGTGGCCGTAGTTCTCGATCAGGTATGCACAAAGAAAGCCG 43024 || || | | ||| || | |||||| | | ||| | | || || || | Sbjct 509 ACAAAGTGAAAGTCGTAAGCATCCGAGTAGTTTTGCAAAAGGAAATCGCACAGTAACGCC 568 Query 43025 GACGACTGGCCGCCGGAAAAGCTGACGACAAGCGGCTCTTT 43065 || ||||| || || ||||| ||||| || | ||||| || Sbjct 569 GATGACTGACCTCCTGAAAAACTGACAACCATTGGCTCCTT 609 >seq60383 Length=344 Score = 174 bits (192), Expect = 6e-39 Identities = 200/266 (75%), Gaps = 6/266 (2%) Strand=Plus/Plus Query 17174 CCCGCGTTGCTCCGTTCGTTGCACCGAACGTACAGGGCCGCGTGATCAAAGAAAGCGGCT 17233 ||||||| || || | ||| || |||||||| |||||||||| ||||||||| |||| Sbjct 1 CCCGCGTAGCACCTTACGTGGCGCCGAACGTCGAGGGCCGCGTTATCAAAGAAGAAGGCT 60 Query 17234 ACAACACGAAGACTTTTAAACCAGCCTACGTGAAGCCGAAACACGTCATCGACCCTAACA 17293 | | ||| | || || || || ||||| || || || ||||| ||||| || ||| Sbjct 61 GGACCGCGATGCGATTCAAGCCTGCTTACGTTAAACCTAAGCACGTTATCGATCCAAACC 120 Query 17294 TGATCATCCCGCGTCAACCGGGTGAAG--CGTTGGGTACTGGCACCCTGTCTATCGCGCA 17351 |||| ||||| || || || |||| ||| ||||| || |||||| | | || Sbjct 121 TGATTATCCCTGTGCAGCCAGGCGAAGACCGTAC---ACTGGTACGCTGTCTCTGTCTCA 177 Query 17352 GCGCCGCGACCGTGTCATCGCATATCTGCTGATGAAACACCGCGCCATGCACGAAAATAC 17411 |||||| |||||||| |||||||| ||||| ||||| ||||| || |||||||||| || Sbjct 178 GCGCCGTGACCGTGTTATCGCATACCTGCTTATGAAGCACCGTGCGATGCACGAAAC-AC 236 Query 17412 GTGGGAATGGATGGCGGCGCAGGCTG 17437 |||||||| | | |||||||||||| Sbjct 237 ATGGGAATGCAGGACGGCGCAGGCTG 262 >seq76547 Length=445 Score = 122 bits (134), Expect = 3e-23 Identities = 242/348 (70%), Gaps = 18/348 (5%) Strand=Plus/Minus Query 15446 ATGCGCGAAAACCTGTGTGCAGCGTATGGCGTAGGCC-GACCATCTGCGGACAAACCTTT 15504 |||||| ||| || || | | |||||||||| || | | ||| ||| ||||||||||| Sbjct 350 ATGCGCAAAACGCTCTGCGAAACGTATGGCGTTGGGCAGGCCAG-TGCAGACAAACCTTT 292 Query 15505 CGCCTTTTCCAACGGCCTCGCCATCATCCCGATTCATGGCACCCTGATTAACCGCTACGG 15564 || || ||||| ||||||||| |||||||| || | |||||||||||||||||| Sbjct 291 TGCTTTCGTTAACGGTACCGCCATCATTCCGATTCACGGTAGCCTGATTAACCGCTACGG 232 Query 15565 CGGGTATTACTACGGCTACGTGACGGGCTACAATTTTATCCGCAGTCAG--CGTAAT-GC 15621 || ||||| | || ||||| || || || || || ||||| ||||| | | | || Sbjct 231 TGGCTATTATTTTGGGTACGTAACCGGATATAACTTCATCCGTCGTCAGGCTGCACTGGC 172 Query 15622 AGCGCTGGCCGACCCTGATGTCGAAGCG-ATTATCTACGACGTCAACTCGAACGGCGGGG 15680 || ||| ||| |||||||| |||| ||||| | || || ||| || || || Sbjct 171 GGCAATGGACGA---TGATGTCG-AGCGTATTATTTTTGATGTGAACAGTAATGGTGGTC 116 Query 15681 AAGCGGCGGGCTGTTTCGAG-TTGTCTCAGGAAATGTTTGATACACGCGGCGAGAAACCT 15739 | || | || ||||| ||| ||| | || ||| | | | ||| || || Sbjct 115 AGGCATCCGGTTGTTTTGAGCTTGCCGCA-GAACT------CGCCAACCTCGAAAAGCCA 63 Query 15740 TCGCTGGCGGTTGTCGATTCAAACTGCTATTCTGCGGCATATGCGTTG 15787 || ||||||| || ||| | ||||| ||||| || ||||| ||| || Sbjct 62 ACGATGGCGGTCGTGGATGCGAACTGTTATTCAGCAGCATACGCGCTG 15 >seq98424 Length=301 Score = 116 bits (128), Expect = 1e-21 Identities = 205/294 (70%), Gaps = 6/294 (2%) Strand=Plus/Plus Query 28457 TTCGCGGGCGGCTTCATCGAGTGGATAGATCCGGTGTACGGCGTGGAACGTCGCGGCATC 28516 ||| ||||||| |||||||| |||||||||||| | ||| |||||||||| ||| Sbjct 3 TTCACGGGCGGTTTCATCGAATGGATAGATCCGCAGCGCGGTACTGAACGTCGCGCCATT 62 Query 28517 GAAACCCATACCGGGAATACCATTACCATCTTCGGTACCGTAGACGGCTTGGCCGGGGGC 28576 || || || |||| || | | | | ||||| || ||| ||||||| ||| Sbjct 63 GAGACGCACACCGACAACA-CGCTGGTGTTTTCGGCGTGGTCAGCGGACTGGCCGGTGGC 121 Query 28577 TACATCCTCAAGACTTACCCGGGATGCCCGCGTAC--CAGTACGGCCTGTGATACCATCT 28634 || | ||| ||| || || |||||||| || ||| | || || | | | Sbjct 122 ATGGTCATTAAGGTTTATCCTGGTTGCCCGCGCACGTCAG--CTGCGTGCCAGAGTCGTT 179 Query 28635 TCAACAATCTGGCGAACTTCGGCGGTATCCCGTCGCTGCCAGACCGTTCCCCGTTCGACG 28694 | ||||| |||| || | ||||| ||| || |||| |||||| ||||| |||| Sbjct 180 TTAACAACCTGGACAATTATGGCGGCATCATCTCAATGCCGTCCCGTTCGCCGTTTGACG 239 Query 28695 GCAACCCAATCTTTTAAGGAGAATCGCTATGTGGTGGGCGTTAGCTATGCTGGT 28748 |||| ||| |||| ||||| ||| |||||||||||||| ||||| |||||||| Sbjct 240 GCAATCCAGTCTTCTAAGGGGAA-AGCTATGTGGTGGGCATTAGCCATGCTGGT 292 >seq129722 Length=886 Score = 91.5 bits (100), Expect = 6e-14 Identities = 111/148 (75%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 20644 ACTACTACTTCCCGAAAGTGTCTCTCGCGCCGGACGGCGACTACGCACTGAAAGGCGACG 20703 |||||| ||||||||||||| | || |||||| |||||||| || ||||| || || | Sbjct 11 ACTACTTCTTCCCGAAAGTGGCGCTGCAGCCGGATGGCGACTATGCGCTGAAGGGTGATG 70 Query 20704 ACTGGCAGGTCATGTCCTTCACCTTCAAGGCCATGCAGCT--TAACAACATCACGCAGCG 20761 |||||||||| ||||| ||||| ||| || || |||| | | | | ||| |||| Sbjct 71 ACTGGCAGGTTATGTCGTTCACGTTCTCTGCACTGAAGCTGGGATCGGCGT-ACG-AGCG 128 Query 20762 CGTCTACATCGACATCGTCGAAGCGGCC 20789 ||| |||||||| || ||| ||| || Sbjct 129 CGTTTACATCGATGTCCGCGATGCGTCC 156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190769961808800