Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_021782.1 Length=72098 Score E Sequences producing significant alignments: (Bits) Value seq40687 107 9e-19 seq38457 100 1e-16 seq99145 91.5 7e-14 >seq40687 Length=4650 Score = 107 bits (118), Expect = 9e-19 Identities = 127/172 (74%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 7971 AACCAAGTTAGTTGAAACTGGTTTGGCTATTCATCTGGATGATGTGAAGTATGCAGCAAT 8030 ||||| ||| || || ||| |||||||||| | | ||| ||| ||| || | Sbjct 2365 AACCACATTAATTCCTACCGGTCTGGCTATTCACATCGCCGATCCGAACCTTGCCGCCGT 2424 Query 8031 GATTCTTCCTCGTTCAGGTCTGGGCCATAAGCATGGTGTAGTGCTTGGGAACCTTACTGG 8090 ||||||||| || || || |||||||| || |||||| | || || || || || ||| Sbjct 2425 GATTCTTCCGCGCTCTGGCCTGGGCCACAAACATGGTATTGTCCTGGGTAATCTGGTTGG 2484 Query 8091 TCTGATTGATTCAGACTATCAGGGTGAACTTATGGTAAGCCTCTGGAATCGC 8142 |||||||||| | ||||||||||| ||||||||||| | ||||||||| Sbjct 2485 TCTGATTGATGCCGACTATCAGGGACAACTTATGGTATCGGTATGGAATCGC 2536 >seq38457 Length=3703 Score = 100 bits (110), Expect = 1e-16 Identities = 136/181 (75%), Gaps = 13/181 (7%) Strand=Plus/Plus Query 64595 GTACTCTTT--GATAGTTTTCGTAAGCGATTATGCGGTTTTTTAGAAACGAACCATAAAA 64652 || |||||| ||||||||||||| |||| | ||||| |||||||||||| |||| |||| Sbjct 2837 GTGCTCTTTCCGATAGTTTTCGTATGCGACTTTGCGGGTTTTTAGAAACGGACCACAAAA 2896 Query 64653 CATAAATGCAAACGATGATGTTGTTCTGATGT--CGGCTTAACAGCCTATAAATCAGTGA 64710 |||||||||||||| || ||| | | || | || |||| ||| | | | | Sbjct 2897 AGTAAATGCAAACGATAGTG-AGTT-TAAAGTAGCAGCCTAACGGCC-AACGCGCTTTCA 2953 Query 64711 -GGTATTCCAGTTCCTCATAACAGAATCTGGAGCACT--GGCCC---GGTGTGATTAATA 64764 |||||||||||||| |||| |||||||| ||| | ||||| | ||||||||||| Sbjct 2954 TGGTATTCCAGTTCCATGTAACCGAATCTGGCGCATTGCGGCCCTGAGATGTGATTAATA 3013 Query 64765 A 64765 | Sbjct 3014 A 3014 >seq99145 Length=730 Score = 91.5 bits (100), Expect = 7e-14 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 62528 TGGAAGATTCCGCTCAGTGGTGGGCAATCCGGTTTGAACCCGGAGGTGCTGGTAACGGTA 62587 |||||| |||||| |||||| |||||||||||||||||||||||| | | || || | Sbjct 468 TGGAAGGCTCCGCTAAGTGGTTGGCAATCCGGTTTGAACCCGGAGGGGTCCGAAAGGGCA 409 Query 62588 GGGGTTCGACTCCTCAATCTTCCGCCAA 62615 ||||||| |||||||| ||||||||| Sbjct 408 GGGGTTCAACTCCTCAGCTTTCCGCCAA 381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230222617779700