Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2641 98.7 8e-16 seq28556 91.5 1e-13 >seq2641 Length=263 Score = 98.7 bits (108), Expect = 8e-16 Identities = 148/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 110293 TTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTCGGCCAGGTAAA 110352 ||| |||||||| || || ||| | ||| || || |||||| ||| | | || || Sbjct 41 TTTGACCGGCAAGACTATCACCCTTGAAGTTGAATCTTCGGATACTATCGACAATGTCAA 100 Query 110353 ACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGG 110412 | || ||| ||||| || || | ||| ||||||||| |||| || | ||| || Sbjct 101 AACCAA-ATTCAAGACAAGGAGGGTATTCCCCCCGATCAACAACGACTCATCTTTGCTGG 159 Query 110413 TAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTT 110472 ||| ||| |||| |||| |||| | || |||||||||||||| ||||||||||| | Sbjct 160 TAAGCAGTTGGAAGATGGTCGAACCCTTGCCGATTACAACATTCAGAAAGAATCTACTCT 219 Query 110473 GCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||| |||| | |||| || || |||| Sbjct 220 GCATCTGGTTCTTCGACTTCGTGGTGGAA 248 >seq28556 Length=388 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || ||||| || | |||||||| ||||| || | ||| ||| || Sbjct 283 AATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACGCTAGAAGTAGAGTCTTC 224 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| | | | | || || |||||| |||||||||||| | || ||| || Sbjct 223 GGATACCATTGACAATGTCAAGTCGAAGATCCAGGACAAAGAAGGCATTCCTCCGGACCA 164 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | || || | || || || |||||||| |||| | | || | | |||||||| Sbjct 163 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGTACCCTCTCTGATTACAA 104 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||| || ||||| | ||| |||| | |||| || || || Sbjct 103 CATTCAAAAGGAGTCTACCCTTCACTTGGTCCTTCGACTTCGTGGCGG 56 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412185994637900