Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_022055.1 Length=59179 Score E Sequences producing significant alignments: (Bits) Value seq77134 114 5e-21 >seq77134 Length=829 Score = 114 bits (126), Expect = 5e-21 Identities = 115/147 (78%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 44861 CGAGATGTGGAAGCAATGCCTGCGGGTCCTCAAACCCGGTGGGCACCTGCTCGCCTTCGG 44920 |||||| ||| | |||||||| || ||||| || || || |||||||| || || | Sbjct 548 CGAGATTTGGGCTGAGTGCCTGCGCGTGCTCAAGCCTGGCGGCCACCTGCTGGCGTTTGC 607 Query 44921 CGGCTCCCGCACCTGGCACCGGCTCGC-GTCGGCCATCGAGGACGCGGGCTTCGAGATCC 44979 |||| |||||||| |||||| | || ||| || ||||||||||| || |||||||||| Sbjct 608 CGGCACCCGCACCCAGCACCGCATGGCCGTCCGC-ATCGAGGACGCCGGGTTCGAGATCC 666 Query 44980 GCGACTCCATCGCCTGGCTCTACGGGT 45006 ||||| ||||||||| | ||||||| Sbjct 667 GCGACATGATCGCCTGGGTTTACGGGT 693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188958369252600