Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq73449 150 1e-31 seq128899 104 2e-17 seq81331 104 2e-17 seq61695 91.5 1e-13 seq96858 87.8 1e-12 seq23453 84.2 2e-11 >seq73449 Length=503 Score = 150 bits (166), Expect = 1e-31 Identities = 219/302 (73%), Gaps = 7/302 (2%) Strand=Plus/Plus Query 95557 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCACCCTC 95616 |||||||| |||||||| | ||||||||| || ||||| | || || || || Sbjct 129 CGCCCCCATCGGCAGGAAGAGTCCGTCACCCTGACCGATGAGACGATCCGCGCCGGGCTG 188 Query 95617 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTG-GCGAACGAGAGCCTAGACGGCA 95675 || ||||| || ||| ||||||| | || | ||||||| ||| | || |||| Sbjct 189 ATCGAGGATGACGCGGGAGTCGGTGAC-GCTGGTCACCGCGAACGCGAGTCGCGAGGGCA 247 Query 95676 CGTTGGAT-TTGATAAGGCCTGT-GACTACATCCACGGAGGGCCGCTGCGTCGCCAGGAC 95733 |||||| ||||| ||||| || ||| || || |||||||| ||||| ||||| ||||| Sbjct 248 CGTTGGCCCTTGATCAGGCCCGTCGACGACGTCGACGGAGGGACGCTGGGTCGCGAGGAC 307 Query 95734 GAGATGAATGCCGGCTG-CGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTT 95792 ||| || ||| | |||| | || || ||||| ||||||||| || | ||||||| | Sbjct 308 GAGGTGGATGGCCGCTGGCTCGGGCGAGCTGGGTGATGCGGACGATCGAGTCCTCGACGT 367 Query 95793 CTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGG 95852 | | | || |||||||||||||| || ||||||||||| || |||| | ||||| Sbjct 368 CGCGC--GGCGCGACCCATCATGAGGTCGGCGAGCTCGTCGACGACGACCAGCAGGTAGG 425 Query 95853 GG 95854 || Sbjct 426 GG 427 >seq128899 Length=508 Score = 104 bits (114), Expect = 2e-17 Identities = 135/186 (73%), Gaps = 3/186 (2%) Strand=Plus/Minus Query 95671 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 95730 ||| | ||| | ||||| ||| |||| || || || ||||| ||||||||||||| Sbjct 486 CGGGAAGTTCGCCTTGATCGTGCCGGTGATGACGTCGACCGAGGGGCGCTGCGTCGCCAT 427 Query 95731 GACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGAC 95790 || || || |||||||| ||||||||| ||||||||| ||| | || | |||| Sbjct 426 GATGACGTGGATGCCGGCGGCGCGCGCCATCTGGGCGAGGCGCTGGACCGTGCCTTCGAT 367 Query 95791 TTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTA 95850 || |||| | | ||||||| ||||| |||| |||||||| | || |||||||| Sbjct 366 GTC---CTTGCCGGCCACCATCATCAGGTCGGCCATCTCGTCGATGATGACGACGATGTA 310 Query 95851 GGGGAG 95856 ||| || Sbjct 309 GGGCAG 304 >seq81331 Length=977 Score = 104 bits (114), Expect = 2e-17 Identities = 135/186 (73%), Gaps = 3/186 (2%) Strand=Plus/Plus Query 95671 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 95730 ||| | ||| | ||||| ||| |||| || || || ||||| ||||||||||||| Sbjct 23 CGGGAAGTTCGCCTTGATCGTGCCGGTGATGACGTCGACCGAGGGGCGCTGCGTCGCCAT 82 Query 95731 GACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGAC 95790 || || || |||||||| ||||||||| ||||||||| ||| | || | |||| Sbjct 83 GATGACGTGGATGCCGGCGGCGCGCGCCATCTGGGCGAGGCGCTGGACCGTGCCTTCGAT 142 Query 95791 TTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTA 95850 || |||| | | ||||||| ||||| |||| |||||||| | || |||||||| Sbjct 143 GTC---CTTGCCGGCCACCATCATCAGGTCGGCCATCTCGTCGATGATGACGACGATGTA 199 Query 95851 GGGGAG 95856 ||| || Sbjct 200 GGGCAG 205 >seq61695 Length=1195 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 95945 ACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGG 96004 ||||||| | ||| |||||||| || || | || || ||||| |||| || Sbjct 1093 ACCGCCTTCTTGGGATCGGTGACGACGGGGGTGAGCAGATGCGGGATGCCGTCATAGACC 1034 Query 96005 GTGAGTTCCACCATCTTCGGGTCGATCATGATGAGCTTGACCCGATCAGGATTGGCTCGG 96064 | || |||| |||||| || |||| |||||| ||| | | | || || || ||| Sbjct 1033 GACAGCTCCAGCATCTTGGGATCGACCATGATCAGCCGGCACTGCTCCGGGGTGAGCCGG 974 Query 96065 TAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCA 96124 ||||| || || | | ||||| |||||| | ||||||||||| ||||| | ||| Sbjct 973 TAGAGGATCGACAGGATCATCGTGTTGATCGCGACCGACTTGCCCGAGCCGGTCGTGCCC 914 Query 96125 GCCACCAGCAGGTGGGGCAT 96144 || ||||||||||| ||||| Sbjct 913 GCGACCAGCAGGTGCGGCAT 894 >seq96858 Length=533 Score = 87.8 bits (96), Expect = 1e-12 Identities = 128/178 (72%), Gaps = 5/178 (3%) Strand=Plus/Plus Query 95671 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 95730 ||||| ||| | ||||| | ||| |||| || || || || || ||||||||||||| Sbjct 50 CGGCAGGTTCGCCTTGATCACGCCGGTGATGACGTCGACCGACGGGCGCTGCGTCGCCAT 109 Query 95731 GACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGA-TGCGGACAATGTTGGCCTCGA 95789 || ||| || ||||| || || |||||||| || |||| ||| || | |||| Sbjct 110 GATGAGGTGGATGCC-GCCGCACGCGCCTTTTGCGCGAGGGCGCTGGATCAGGAATTCGA 168 Query 95790 CTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGAT 95847 | || |||| | || |||||| ||||| |||||||||||||| | || ||||| Sbjct 169 CCTC---CTTGCCGGCGGTCATCATCAGGTCGGCCAGCTCGTCGACGATGACGACGAT 223 >seq23453 Length=293 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/134 (75%), Gaps = 4/134 (3%) Strand=Plus/Minus Query 98250 CCGCCCGCCGTCCTGGAC--GTGCGCCAGATGGCCCTTCAGGTCGTGTTCCTCGGTGGCC 98307 ||| |||||||| || | |||| || | ||| ||| | |||||| |||||||||||| Sbjct 194 CCGGCCGCCGTC--GGTCCTGTGCACCTGGTGGAACTTGACGTCGTGGTCCTCGGTGGCC 137 Query 98308 GCGTACATCTTCACCGGCACGTTGACCAACCCGAAGTTGACCGCGCCTGTCCAAACCGCT 98367 | ||||| |||||||| | ||||| ||||||| ||||||||| |||| | || Sbjct 136 GAGTACAGCTTCACCGCGATCGAGACCAGCCCGAAGGAGACCGCGCCCTTCCAGATCGAC 77 Query 98368 CTCATGCCTGCCCC 98381 | |||||| | ||| Sbjct 76 CGCATGCCCGTCCC 63 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351188614454300