Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq9999 194 3e-43 seq97599 176 7e-38 seq51865 152 8e-31 seq8712 141 1e-27 seq84225 114 2e-19 seq44974 113 7e-19 seq11762 105 1e-16 seq25805 95.1 2e-13 seq50426 87.8 3e-11 >seq9999 Length=8348 Score = 194 bits (214), Expect = 3e-43 Identities = 293/414 (71%), Gaps = 7/414 (2%) Strand=Plus/Plus Query 118625 CACGCCGCGCATGCACACGCACATGTGGAGGCCCTCGAGCACGACGCCGACGCCGCGCGC 118684 |||||||||||| || ||||||||| | |||||| || || |||| ||| || Sbjct 792 CACGCCGCGCATCATCATGCACATGTGCTGCGCCTCGATGACCACCGCGACCCCGGCGGC 851 Query 118685 GCCCGTGACCTCGCTGATGCTCTCGGCGATCTGGCGCGTGAGCGCCTCCTGCACCTGGAA 118744 || || |||| |||| |||||||||||| || || | | ||||| | ||| | Sbjct 852 ACCGGTAACCTGTTCGATGGCCTCGGCGATCTGCCGGGTCAT-GTTTCCTGGATCTGCAG 910 Query 118745 GCGGTCCGAGAGCATGTCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGC 118804 || | || |||||||||||| |||| | |||| |||||||| | | ||||| Sbjct 911 CCGACGGGCGAACATGTCGACGATACGCGCCACCTTGGACAGGCCGAGCACCTTGCCCTT 970 Query 118805 GGGCAGGTAGCCCACGTGCGCCTTGCCGATAAAGGGCAGCAGATGGTGCTCGCACATGGA 118864 ||||| |||| | ||||| ||||||||||| |||||||||| ||||||||||||| ||| Sbjct 971 GGGCATGTAGGCGACGTGGGCCTTGCCGATGAAGGGCAGCATGTGGTGCTCGCACAGGGA 1030 Query 118865 GAAAAAGTCAATGTCGCGCACGGTCACCATCTCGCCCGACGTCTCGGCA---AAGAGGGC 118921 | | | || |||| || ||||||||||| | |||| | ||||| || Sbjct 1031 GTACAGCTCGATGTTCTTGACCAGCACCATCTCGC---TGTTGTCGGAAGTGAAGAGCGC 1087 Query 118922 GTCGCCGACGGCCTCGGCCAGGGTCAGGCGGTGGCCGCGCGTGCGCTCCACCATGGCCTT 118981 ||||| || |||| |||| ||| || || ||| || | | | | ||||||||| Sbjct 1088 CTCGCCCACCACCTCTTCCAGCGTCTGGTTGTAGCCACGGCAGAGGTACTGCATGGCCTT 1147 Query 118982 GGCCACGCGCATGGGCGTGTCCAAGAGGCCCTCGCGCGCCACGTCCTCGCCCAG 119035 |||| ||||| |||||||||||| || ||||| || | | ||| ||||| || Sbjct 1148 GGCCGCGCGCTTGGGCGTGTCCACCAGCCCCTCCCGGCCGATGTCTTCGCCGAG 1201 >seq97599 Length=510 Score = 176 bits (194), Expect = 7e-38 Identities = 301/429 (70%), Gaps = 6/429 (1%) Strand=Plus/Minus Query 118625 CACGCCGCGCATGCACACGCACATGTGGAGGCCCTCGAGC-ACGACGCCGACGCCGCGCG 118683 |||||||||||| || ||||||||| | |||||| || || | |||||| | Sbjct 494 CACGCCGCGCATCATCATGCACATGTGCTGCGCCTCGACTGACCACCGC-ACGCCGGCGG 436 Query 118684 CGCCCGTGACCTCGCT-GATGCTCTCGGCGATCTGGCGCGTGAGCGCCTCCTGCACCTGG 118742 | || ||||||| || |||| ||||||||||||||| || | |||||| | ||| Sbjct 435 CACCGGTGACCTTCCTCGATGGCCTCGGCGATCTGGCGGGTCATGTTCTCCTGGATCTGC 376 Query 118743 AAGCGGTCCGAGAGCATGTCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCC 118802 | ||| | || ||||||||||||||||| | |||| ||| || | | | |||| Sbjct 375 AGGCGACGGGCGAACATGTCGACGATGCGCGCCACCTTGGACAGCCCCAGCACCTTGCCG 316 Query 118803 GCGGGCAGGTAGCCCACGTGCGCCTTGCCGATAAAGGGCAGCAGATGGTGCTCGCACATG 118862 ||||| |||| | || || ||||||||||| |||||||||| ||||| ||||||| | Sbjct 315 CTGGGCATGTAGGCGACATGGGCCTTGCCGATGAAGGGCAGCATGTGGTGTTCGCACAGG 256 Query 118863 GAGAAAAAGTCAATGTCGCGCACGGTCACCATCTCGCCCGACGT-CTCGGCAAAGAGGGC 118921 ||| | | || |||| || |||||||||| | | || | || ||||| || Sbjct 255 GAGTACAGCTCGATGTTCTTGACCAGCACCATCTCG-CTGTTGTCCGAGGTGAAGAGCGC 197 Query 118922 GTCGCCGACGGCCTCGGCCAGGGTCAGGCGGTGGCCGCGCGTGCGCTCCACCATGGCCTT 118981 ||||| || | || |||| ||| ||| || |||||| | | | ||||||||| Sbjct 196 CTCGCCCACCACTTCTTCCAGTGTCTGGCTGTAGCCGCGGCAAAGGTACTGCATGGCCTT 137 Query 118982 GGCCACGC-GCATGGGCGTGTCCAAGAGGCCCTCGCGCGCCACGTCCTCGCCCAGACAGA 119040 |||| | | || ||||||| |||| || ||||| || | | ||| ||||| || | | Sbjct 136 GGCCGCCCGGCTTGGGCGTATCCACCAGCCCCTCCCGGCCGATGTCTTCGCCGAGTCCGG 77 Query 119041 CCAGCATGG 119049 ||| |||| Sbjct 76 TCAGAATGG 68 >seq51865 Length=821 Score = 152 bits (168), Expect = 8e-31 Identities = 193/262 (74%), Gaps = 10/262 (4%) Strand=Plus/Minus Query 793948 CGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACC 794007 |||||||||| |||||| | || ||||||| | |||||| | || | | Sbjct 820 CGAGCGAGATGTTCTCCATAAAGTCAAAAGGGTTGGTGGCGTGGTAGTACCTCGTGTTGC 761 Query 794008 CGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGT 794067 |||| || ||||| ||||||||||| || |||||||||||||||||||||| ||||| Sbjct 760 CGAGGGAGAGCAGCAGCCGGTCGGCGACAAACTCAATGTACTGGCACATGAGGGTGGCGT 701 Query 794068 TCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA--AACTCTTTCTCGATCTCGAC 794125 ||||||||| ||||| ||||| | ||| |||| ||||| |||||||||||||| Sbjct 700 TCATGCCGAGCAGCGCACAAGGCAGGGCGTCG--GACAGGAACTCCTTCTCGATCTCGAC 643 Query 794126 GGCCTCGATGATGAT---CTGCCTGGGCACGTCGGACGACGGCTTGTCGACGAGCATCGT 794182 ||||||| ||||||| ||| || | | ||| | | |||| || ||| || Sbjct 642 GGCCTCGGTGATGATGGCTTGCACGGCGTCTTTGGAGGGGCGGTTGTTGAGGAG---CGA 586 Query 794183 GTAGAGCAGGCAGGCAAAGTCG 794204 | |||||||||||||||||||| Sbjct 585 GAAGAGCAGGCAGGCAAAGTCG 564 Score = 95.1 bits (104), Expect = 2e-13 Identities = 139/195 (71%), Gaps = 10/195 (5%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| || ||| | |||||| |||| |||||||||||||||||| |||||| Sbjct 554 CCTTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTGAGGCCGGGCATGAGGCCACGCTTC 495 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||||| |||| ||| ||| ||||| || || || || || || Sbjct 494 TTGAGCCAGAAGATGGAGGCGAAAGAGCCACTGAAGAAGATTCCTTCCACCGCAGCGAAC 435 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGT----TGATCCACTTCATCGC 794516 | || || || | |||||| ||| || | ||||| ||||||| || || Sbjct 434 GCTACCAGACGGTTGGCAAAGGTG--GAG----TTTTTGTCCGGAGATCCACCGCAGGGC 381 Query 794517 CCACTCTGCCTTTTT 794531 ||| || |||||||| Sbjct 380 CCAGTCAGCCTTTTT 366 >seq8712 Length=1748 Score = 141 bits (156), Expect = 1e-27 Identities = 338/507 (67%), Gaps = 27/507 (5%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| || | || |||| ||| || ||||| |||||||| || | |||||| || Sbjct 328 CTGGTCGACGTATCTGGCGGTGTTGTTGAACACGCGAAGCATGGGAACGACGCCGTTTGA 387 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||||||| || | ||| | ||| | ||| || | ||| || | ||| Sbjct 388 GGTGCCGTTGGTGCCGGCAATGTACGAGCCAGTGGCACGAATGCGGTGGACGTTCAGGCC 447 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||||||||| ||| ||||||||| | |||||| | | || || || |||||||| || Sbjct 448 GATGCCGCCAGCCATCTTGGAGATCATGGCGCAC-GTCTGAGGGTGTCATAGATGCCTTC 506 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGC---GCGCCGT 2073776 ||| ||| |||||| ||| | || ||||| || || || ||| | | ||| Sbjct 507 GATGCTGTCATCCTTCA-GTCGACAAGGAAGCAGGATGA---CAGCTGGCATTGTGGCGT 562 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTG--GGACATGGCCTCG 2073834 || || ||||| || ||||||| || ||| | || | ||| |||||| | | Sbjct 563 ACCAGCGTTGAATAGTGTGGGCGAGGCGTGGGTG-AAGAAT-TTGCTCGACATGAGGTTG 620 Query 2073835 TAGGTGGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATG 2073894 ||||| | || || ||| |||| |||| || || |||| | Sbjct 621 TAGGTTTCCAGGACACGCTCCAGGTTGTCT---------------CCCCAGATACCGACG 665 Query 2073895 GCGACGCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGG 2073954 || || ||||| ||||||| ||| ||||||||||| | | || | |||| || Sbjct 666 GCAACACGCATAATCATGTGCTGTGGTCGCTCGACAATCTTGCCGTTGAGCTTGAGGAGA 725 Query 2073955 TAGGACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGG 2074014 ||||| || ||| ||| | |||||||||| |||| | ||| | |||| | Sbjct 726 TAGGATCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCTCTGTCGTAGACA 785 Query 2074015 ATGGCGGCGTCGAGGGCCTCCTTGTGC 2074041 ||||| | |||||| ||||||||||| Sbjct 786 ATGGCAGAGTCGAGTTCCTCCTTGTGC 812 >seq84225 Length=632 Score = 114 bits (126), Expect = 2e-19 Identities = 90/108 (83%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||||||||||||||| | |||||||| | || |||||||| || |||||| Sbjct 220 GCTGCCAACTACCTCGACATCAAGGCTCTCCTCGACGTCGGCTGCAAGACGGTCGCCAAC 161 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATC 2035754 | |||||||| |||||||||||| | ||||||||||| |||||| Sbjct 160 ATGATCAAGGGAAAGTCGCCCGAGAGATTTCGCAAGACCTTCAACATC 113 >seq44974 Length=881 Score = 113 bits (124), Expect = 7e-19 Identities = 175/250 (70%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| ||||||||| || ||| ||| || ||||| |||||||| | | Sbjct 264 TGACACCAGCCTTTTGATACTCGCCGACTCGCTTCTCAAAGAAGTTCGTCTTGCCGCCTA 323 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | || || |||||| | || |||||||| ||| ||| ||||||| || | Sbjct 324 GGGAAATGTTCTCCATGAAATCAAAGGGGTTGGCAGTCTTGTACACCTTCTCGTTACCCA 383 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | || ||||| ||||||||||||||||||||||| ||| | | |||||||| Sbjct 384 GTGCAACCAGGAGGCGATCGGCGACGAATTCAATGTACTGCTTCATCAACGTGGCGTTCA 443 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 | |||| ||| || |||| | ||| | | ||||||| |||||| ||| || | Sbjct 444 TACCGAGGAGAGCGCATGGCAATGCCTCTGTCAAGAACTCTTGCTCGATGGTGACAGCAT 503 Query 794131 CGATGATGAT 794140 | |||| || Sbjct 504 CTGTGATAAT 513 >seq11762 Length=7374 Score = 105 bits (116), Expect = 1e-16 Identities = 142/193 (74%), Gaps = 11/193 (6%) Strand=Plus/Plus Query 106958 TCCCTAGTGACGGAAATGGCGCATGCCGGTAAAGACCATGGCGACGCCGGCCTCGTCGCA 107017 ||| ||||| ||||| |||||||||||||||||||||||||||| |||||| |||||| Sbjct 6576 TCCTTAGTGGCGGAAGTGGCGCATGCCGGTAAAGACCATGGCGATGCCGGCTTCGTCGGC 6635 Query 107018 CGCGGCGATCGAGGGCTTGTCGCCGCCGCGC---GACCCGCCCGGCTGCACGATGGCGAC 107074 |||||||| || ||| || ||||| || ||||||||||| | | ||| Sbjct 6636 GGCGGCGAT-GA-----CCTCGGCGTCGCGCATGGAGCCGCCCGGCTGGATCACCGCGGT 6689 Query 107075 GACGCCGCCGGCGATGGCCTTGCTCG-GCCCGTCGGGAAAGGGAAAGTAGGCGTCGCTGG 107133 || |||| ||| ||| ||| ||| ||||| | ||||| ||| ||||||| || Sbjct 6690 GATGCCGTTGGCCGCGGCGTTG-TCGATGCCGTCACGGAAGGGGAAGAAGGCGTCCGAGG 6748 Query 107134 CCATCACTGTGCC 107146 |||| || | ||| Sbjct 6749 CCATGACCGCGCC 6761 >seq25805 Length=882 Score = 95.1 bits (104), Expect = 2e-13 Identities = 186/265 (70%), Gaps = 10/265 (4%) Strand=Plus/Plus Query 118599 GTGACCGTGTTTGAC-CCGTTCTTGCGCACGCCGCGCATGCACACGCACATGTGGAGGCC 118657 |||||| || | ||| ||| |||| | | |||||| || || |||| ||| ||| Sbjct 299 GTGACCATGCT-GACGCCGCGCTTGTGGATGCCGCGGGTGGTCATGCACTCGTGCGCGCC 357 Query 118658 CTCGAGCACGACGCCGACGCCGCGCGCGCCCGTGACCTCGCTGATGCTCTCGGCGATCTG 118717 || | ||| ||||| ||||| ||| | || || ||||| || ||||||||| Sbjct 358 TTCCACCACCACGCCCACGCCCAGCGGCTGCAGCACGTCCTGGATGCACTGGGCGATCTG 417 Query 118718 GCGCG-TGAGCGCCTCCTGCACCTGGAAGCGGTCCGAGAGCATG--TCGACGATGCGCGG 118774 |||| | | | |||||||||||||||||| ||| | | | ||||| | ||||| Sbjct 418 -CGCGGTCATCTTCTCCTGCACCTGGAAGCG--CCGCGCATAGGCCTCGACCACGCGCGC 474 Query 118775 GATCTTGCTCAGGCCGATGATCCTGCCCGCG-GGCAGGTAGCCCACGTGCGCCTTGCCGA 118833 | |||||| | ||| | | | |||| ||| ||||||||||| ||||| ||||||||| Sbjct 475 CAGCTTGCTGATGCCCACCACCTTGCC-GCGCGGCAGGTAGCCGACGTGGACCTTGCCGA 533 Query 118834 TAAAGGGCAGCAGATGGTGCTCGCA 118858 | | ||| || ||||| ||||| Sbjct 534 TGATCGGCGCCATGTGGTGTTCGCA 558 >seq50426 Length=633 Score = 87.8 bits (96), Expect = 3e-11 Identities = 112/149 (75%), Gaps = 4/149 (3%) Strand=Plus/Plus Query 2076053 TGGTCTTTATGCTGTGGGGCCGCGACGCCCAGAGCAAGCGCAAGTTGATCGACCAGAACC 2076112 |||| || ||||||||||| || |||||||| |||| ||||| | |||||| | Sbjct 12 TGGTGTTCCTGCTGTGGGGCAGCTACGCCCAGGCCAAGGGCAAGGTCATCGACACCCGTC 71 Query 2076113 GACACCGCATCCTCGAAGCCGCC-CACCCCTCGCCCAAGTCGGC-CACCAACGGATTTTT 2076170 | |||||| | ||| ||| |||| ||||||||||| |||||| |||| ||| || | Sbjct 72 GCCACCGCGTGCTC-AAGGCGCCGCACCCCTCGCCGCTGTCGGCGCACC-GCGGCTTCCT 129 Query 2076171 CGGCTGCCGGCACTTTTCGCAGGCCAACG 2076199 ||||||| ||| || ||| |||||||| Sbjct 130 CGGCTGCAAGCATTTCTCGGCGGCCAACG 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7902385794701700