Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_022343.1 Length=159991 Score E Sequences producing significant alignments: (Bits) Value seq31280 120 3e-22 >seq31280 Length=10079 Score = 120 bits (132), Expect = 3e-22 Identities = 277/409 (68%), Gaps = 14/409 (3%) Strand=Plus/Minus Query 15050 CTTCCGACCCCCATCATGGCAGGCGTTCGTACTCCTACCCGTCAGTTCAGTTCATGCGTT 15109 || ||||| || |||||| | || || ||||| || |||||||||||||| || || || Sbjct 1742 CTGCCGACGCCAATCATGTCGGGAGTGCGTACGCCAACCCGTCAGTTCAGCTCCTGTGTC 1683 Query 15110 CTGATCAAAACTGGCGACACGCTGGATTCCATCAACGCAACCGCCAAATCTATCGTAGAC 15169 ||||| || |||||||| ||||||||||||||||| ||| ||| |||| || | Sbjct 1682 CTGATTGAATGTGGCGACAGCCTGGATTCCATCAACGCGACCTCCAGCGCTATTGTGAAA 1623 Query 15170 TATGTGAGCAAGCGTGCTGGCATCGGATTTGACGTTGGTGCAATTCGCGGTATCGGCAGT 15229 || || | || || || || || || ||| ||| || |||| | ||||| Sbjct 1622 TACGTTTCACAACGCGCAGGTATTGGTATTAACGCGGGTCGTATCCGCGCGCTGGGCAGC 1563 Query 15230 CCTATCCGGGGCGGAGAGATGGTCCACACTGGTCTGGTTCCATTCATCA---AATATCTG 15286 || || || ||||| || |||| || ||| | || ||| || | | | | Sbjct 1562 CCGATTCGCGGCGGTGAAGCTTTCCATACCGGTTGTATCCCGTTCTACAAGCACTTCCAG 1503 Query 15287 ACCGGGGCACTGAAGTCGTGCTCTCAGGGCGGTATTCGCGGTGGTGCTGCTACAGC--TT 15344 || | || |||| || || || |||||||| | || || || || || || || || Sbjct 1502 ACAGCGG---TGAAATCCTGTTCGCAGGGCGGCGTCCGTGGCGGCGCAGCGAC-GCTGTT 1447 Query 15345 ATATCCCGCTGTGGCAT-TACCAGTTCGACG-ATGTCGTTGTGTTGAAGAACAACCGTGG 15402 ||| ||| |||||||| | ||| | | ||| | || |||| ||||||||||| Sbjct 1446 CTAT-CCGATGTGGCATCTGGAAGTAGAAAGCCTGT--TAGTCCTGAAAAACAACCGTGG 1390 Query 15403 TACGGAAGAAAACCGCGAGCGCCGTATCGACTATGGTATTCAGATCAAC 15451 | ||||| ||||||| || | || ||||| ||| | ||| ||||| Sbjct 1389 TGTGGAAGGTAACCGCGTACGTCACATGGACTACGGTGTGCAGCTCAAC 1341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511009535388000