Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq28556 113 3e-20 seq29103 98.7 6e-16 >seq28556 Length=388 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| |||||| |||||||| || || || ||| | || |||| Sbjct 71 AGGACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAGAGGGTACGGCCATCT 130 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||||||||||||||| || || |||||||| | || | || || ||||| Sbjct 131 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCTTTGTCC 190 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | || | || | ||| || || | || |||||| Sbjct 191 TGGATCTTCGACTTGACATTGTCAATGGTATCCGAAGACTCTACTTCTAGCGTGATGGTC 250 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || ||||| ||||| Sbjct 251 TTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 282 >seq29103 Length=1863 Score = 98.7 bits (108), Expect = 6e-16 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| |||||||| ||||| | || |||| | || || || ||||| ||||| || Sbjct 1098 CTCCTTTTGAATGTTGTAGTCTGCAAGAGTGCGGCCGTCCTCAAGCTGCTT-CCGGC-AA 1155 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||| || |||||||| | || | ||||||||||| | || || ||||| Sbjct 1156 GATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 1215 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || || |||||| |||| ||| |||||||| ||||| |||||||| || Sbjct 1216 GTCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 1275 Query 34966 AAA 34968 || Sbjct 1276 GAA 1278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325175589655700