Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_022776.1 Length=41757 Score E Sequences producing significant alignments: (Bits) Value seq115158 1278 0.0 seq119229 324 4e-84 seq125025 309 8e-80 seq123790 255 2e-63 seq30831 149 2e-31 >seq115158 Length=1188 Score = 1278 bits (1416), Expect = 0.0 Identities = 970/1134 (86%), Gaps = 8/1134 (1%) Strand=Plus/Plus Query 37777 GTAATACTTCCTATATCTATTTCAAGTGCGAGTTTTTATTTTTCAAGCCAGTCACGCGCC 37836 || || || || || || |||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GTTATTCTCCCCATTTCCATTTCAAGTGCGAGTTTTTATTTTTCAAGCCAGTCACGCGCC 60 Query 37837 TCTCGTTTAGAACATCGAATCA-CTAAATTGGAAGTTGTCGATCACGAGCTTGAGAAAAC 37895 |||||||||||||||||||||| ||||||| || || || || || || | ||||||| Sbjct 61 TCTCGTTTAGAACATCGAATCAGCTAAATTAGAGGTCGTTGACCATGAAATCGAGAAAAT 120 Query 37896 AATAGAGAGTCATAATCAGCGTCTGGACAAGCATCAAGAAGAACAGAAAATTACTTTTGC 37955 || | | |||||| | ||||| ||||| ||||||||||| || ||||| | | | || Sbjct 121 TATTAAAAACCATAATGATCGTCTTGACAAACATCAAGAAGACCA-AAAATAATTCTAGC 179 Query 37956 TCTCGTCCAACGTATGGACCATCTTAACGAAAACATCGGAGAGCTTAAAGGAGATATTGA 38015 ||| |||||| | ||||||||| |||| || ||| | | ||||| |||||| |||| || Sbjct 180 TCTGGTCCAAAGAATGGACCATATTAATGAGAACGTTGTTGAGCTAAAAGGAAATATAGA 239 Query 38016 GGAAATTAAAAAATTAGTAGATAGAAATTTGAGAGGATAAATAACAATATGATTAATTTT 38075 ||| ||||||||||||||||| |||| |||||||||| || || || |||||||||||| Sbjct 240 AGAAGTTAAAAAATTAGTAGATCGAAACTTGAGAGGATGAAGAATAA-ATGATTAATTTT 298 Query 38076 AAATTACGTTTGCAAAATAAAACTACACTAGTAGCTCTTATCTCAGCAGCATTCCTTATG 38135 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 299 AAATTACGTTTGCAAAATAAAACTACACTAGTAGCTCTTATCTCAGCAGTATTCCTTATG 358 Query 38136 CTGCAACAATTAGGGCTTGAAATTCCACACAATATCCAAGACGCTGTCAATACTTTCGTT 38195 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || Sbjct 359 TTGCAACAATTAGGGCTTGAAATTCCACACAATATCCAAGACGCTGTAAATACATTCATT 418 Query 38196 GCAATTTTGGTTATCCTCGGAATCGTTACCGACCCAACAACTAAAGGAATTGCTGACAGC 38255 |||||||||||||||||||||||||||||||||||||| ||||| || ||||| |||||| Sbjct 419 GCAATTTTGGTTATCCTCGGAATCGTTACCGACCCAACCACTAAGGGGATTGCAGACAGC 478 Query 38256 GAACGAGCGTTGACTTACATCAAACCACTAGACGATAAGGAAGGAAAATAGTATGAGCG- 38314 |||||||| |||| || ||||||||||||| ||||||||||||||||||||||| Sbjct 479 GAACGAGCATTGAGCTATGAACAACCACTAGACGAAAAGGAAGGAAAATAGTATGAGCGA 538 Query 38315 TACAGCAATCTATTGTAAGTTGGTTTGTTATCCATGACGGCAAATTGACCTATTCAATGT 38374 |||| ||||||||||||| ||||||||||| |||| |||||||||||||||||||||| Sbjct 539 TACAACAATCTATTGTAAATTGGTTTGTTAACCATCGAGGCAAATTGACCTATTCAATGT 598 Query 38375 ATGGGTCACGTAATGGTTCAGACGGCACTGCTGACTGTTCTGGTTCTATGTCACAAGCCC 38434 |||||||||| || || ||||||| || |||||||| |||||||| || |||||||||| Sbjct 599 ATGGGTCACGCAACGGAGCAGACGGTACAGCTGACTGCTCTGGTTCCATATCACAAGCCC 658 Query 38435 TAAAAGACGCAGGAATTGCAATTCAAGGACTACCATCGACGGTTACCCTTGGGCAACAAC 38494 ||||||| || || |||| |||||||| |||||||| || ||||| || || ||||||| Sbjct 659 TAAAAGAAGCTGGTATTGGTATTCAAGGTCTACCATCTACTGTTACACTAGGTCAACAAC 718 Query 38495 TTGCTAAAAATGGCTTCTATCGTGTAAGTATCAATCAAGACTGGGAAGCTTTGACAGGAG 38554 |||| |||||||| |||||||| |||||||| |||||||| ||||| ||||||||||| | Sbjct 719 TTGCCAAAAATGGATTCTATCGAGTAAGTATTAATCAAGATTGGGATGCTTTGACAGGCG 778 Query 38555 ATATCGTAATGATGTCGTGGGGTGCTGACATGTCACAATCTGGTGGAGCAGGTGGACACG 38614 |||| || | ||||| |||||| |||| ||||| |||||| ||||| || || |||| Sbjct 779 ATATTGTGTTAATGTCATGGGGTTCTGATATGTCCACATCTGGCGGAGCTGGAGGGCACG 838 Query 38615 TTGGTGTCATGATGGATGCTACATACTTTATTAGTTGCGACTACTCAACTCAAGGAGCAG 38674 |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| Sbjct 839 TTGGTGTCATGATGGATGCTACATACTTTATTAGTTGCGATTATTCAACTCAAGGGGCAC 898 Query 38675 TAGGTCAAGCTATCAATACATATCCGTGGAATGACTACTATGCAGCGAACAAGCCTACAT 38734 || |||||||||||||| || ||||||||||||||||||||||||||||||||| ||| Sbjct 899 CTGGGCAAGCTATCAATACTTACCCGTGGAATGACTACTATGCAGCGAACAAGCCTGCAT 958 Query 38735 ATATAGAGGTTTGGCGCTATGCTGACTCTGCACCACAGACTAATAACAAAGCTAATACAG 38794 |||| ||||| ||||| ||| ||||| ||||||| || || || ||| |||||||||||| Sbjct 959 ATATCGAGGTGTGGCGTTATTCTGACACTGCACCGCAAACCAACAACCAAGCTAATACAG 1018 Query 38795 CAG-TAG-TAACACAAGAGAAAGCATACTATGAAGCCAATGAAGTCAAATACGTTAAT-G 38851 ||| ||| | ||||| | || || ||||||||||| |||||||| ||| ||||||| | Sbjct 1019 CAGCTAGACACCACAACAAAAGGCTTACTATGAAGCTAATGAAGTTCAATTCGTTAATGG 1078 Query 38852 GAATTTGGCAGATTAAATGTGATTACTTAACACC-AATTGGCTTCGATTGGCTT 38904 ||||||||||||| |||||||| || || |||| |||| ||||| ||| || Sbjct 1079 GAATTTGGCAGATCAAATGTGACTATTTGGCACCTGGTTGGATTCGACTGGGTT 1132 >seq119229 Length=828 Score = 324 bits (358), Expect = 4e-84 Identities = 230/261 (88%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 2182 TAGAAAGGATAATACATGAACGAATTAATTAATATAACTTTAAACGAAAATCAAGAGCCT 2241 ||||||||| |||||||||| | |||||||| | ||||||||||||||||| ||||| Sbjct 121 TAGAAAGGACAATACATGAATAATTTAATTAACGTTACTTTAAACGAAAATCATGAGCCG 180 Query 2242 GTTGTTTCCGGAAGACAGTTGCATAAAGC-TCTAGGCGTTAAAACAGCTTATAAAGATTG 2300 |||||||| | |||||||| |||||||| ||||||||| ||||| || || |||||||| Sbjct 181 GTTGTTTCTAGCAGACAGTTACATAAAGCCTCTAGGCGTCAAAACCGCCTACAAAGATTG 240 Query 2301 GTTCCCACGTATGACTGAATATGGTTTTACAGATGGTGAAGACTTTAGCTCATTTTTGAG 2360 ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct 241 GTTCCCACGTATGACTGAATATGGTTTTACAGAGGGTGAAGACTTTAGCTCA-TTTTGAG 299 Query 2361 CAAAAGTACCGGAGGGCGACCAAGTCAAGACCACATCATCAAACTAGACATGGCAAAAGA 2420 |||||||||||||||||| ||||| ||||| |||||||| || | |||||||| ||||| Sbjct 300 CAAAAGTACCGGAGGGCGGCCAAGCCAAGATCACATCATTAAGTTGGACATGGCGAAAGA 359 Query 2421 AATTGCAATGATTCAACGTAC 2441 ||| ||||||||||| || || Sbjct 360 AATCGCAATGATTCAGCGAAC 380 >seq125025 Length=589 Score = 309 bits (342), Expect = 8e-80 Identities = 363/481 (75%), Gaps = 11/481 (2%) Strand=Plus/Minus Query 34889 TGTCTGATCGTTGGAATTTCATCGATACTTACATGAACTCATCAAATGATGGGCTTGTGA 34948 |||| || ||| ||||||| ||||||| |||||| |||||||||| || ||||| | Sbjct 482 TGTCAGAACGT-GGAATTTTATCGATAGCTACATGGCAGCATCAAATGAAGGTCTTGTTA 424 Query 34949 TTGGAAAGAA--TGACGGTAGCTCTAGCATGATGTTTAACCCTAACGGTCGCATTTCAAT 35006 |||| || || ||| ||||||| |||| || || || ||||| || || ||||| Sbjct 423 TTGGTAAAAAGATGAATCAAGCTCTATCATG---TTCAATCCAAACGGGCGTATCTCAAT 367 Query 35007 GTACTCGGCAGGGGAGGAGGTCA-TGTATA-TTTCGCAAGGTGTAATACACATCGAGAAC 35064 || ||| || ||| | ||||| | |||| | |||| ||||| | || || ||||| ||| Sbjct 366 GT-CTCAGCTGGGAACGAGGTTAATGTACAATTTCAAAAGGTATCATCCATATCGAAAAC 308 Query 35065 GGGATCTTCTCGAAAACTATCCAAGTTGGTCGATATCGTGAGGAACAGTACCATCTTAAC 35124 || || ||||| ||| |||||||| | || |||||||| |||||||| | | || Sbjct 307 GGTATTTTCTCTAAATCTATCCAAATCGGACGATATCGAGAGGAACAAGATTTATTGAAT 248 Query 35125 CCAGACATGAATGTCATTCGCTATGTAGGAGGTTTTTAATTGGCTGAATTTTGGAGTAAT 35184 |||||| ||||||||| | || ||||||||| |||| ||||||||||||||||||| Sbjct 247 CCAGACCGTAATGTCATTAGATACGTAGGAGGTGCATAAT-GGCTGAATTTTGGAGTAAT 189 Query 35185 AATGATAGAGGCTATAGGATTAGGTTATGGATTGACCAGGTTAGTCAAGACAAAGTAGCT 35244 | || | || ||| | || | | ||| | ||||||||| ||||||| | | Sbjct 188 AC-GACCGTGGATATCGTATCCGTCTTTGGGTCGACCAGGTTGGTCAAGATATCCAAAAC 130 Query 35245 AATACCAGTCAGGTCAGATTTCAACTAGCACTGCTAAATACGACTACGACTTTTGCTCAA 35304 ||||| ||||| || ||||| | | |||| | ||||||||||| || || ||||||||| Sbjct 129 AATACAAGTCAAGTTAGATTGCGATTAGCGTTACTAAATACGACAACTACGTTTGCTCAA 70 Query 35305 TATCAATGTAACGCTTATATCGAGTTTGAAGGTCAAAGATTGAATTGGTCAGGTTCACCT 35364 |||||||||| |||||| |||| ||| | |||||| ||||||||||||| ||||||||| Sbjct 69 TATCAATGTAGTGCTTATGTCGAATTTAACGGTCAACGATTGAATTGGTCTGGTTCACCT 10 Query 35365 A 35365 | Sbjct 9 A 9 >seq123790 Length=336 Score = 255 bits (282), Expect = 2e-63 Identities = 205/246 (83%), Gaps = 1/246 (0%) Strand=Plus/Plus Query 12562 TATACAGAGATTGGGATAATGACACCTCGCAAGGTAATCCAACTTGAAGGTCTTCTATCT 12621 |||||||| ||||| | | ||||||||||||||||||||| | || |||||||| ||| Sbjct 16 TATACAGAAATTGGCAGTTTAACACCTCGCAAGGTAATCCAATTAGAGGGTCTTCTGTCT 75 Query 12622 AGAGAGCTATTTGGCAAAATAGCTAAATATGTATTTAATAAGTATGAATGGCCGGAAAGC 12681 ||||||||||| || || ||||| || || || |||||||||||||||||||| |||||| Sbjct 76 AGAGAGCTATTCGGTAAGATAGCGAAGTACGTCTTTAATAAGTATGAATGGCCAGAAAGC 135 Query 12682 CTAGATAGTGAAGTTGATCGAATTTATTTAGAATATCGCACTAAAGGTGATATAGGGCTT 12741 |||||| | ||||||| |||| |||||||||||||||||||||||| || |||| | | Sbjct 136 CTAGAT-GAAGAGTTGATAGAATCTATTTAGAATATCGCACTAAAGGTAATCTAGGTCGT 194 Query 12742 AATAAGGAAAGTGTTAAACGGACGCTATTCAAAGCGATTTCAATGGGCTTATAGTGGTTC 12801 |||| |||||||||||||| || |||| |||||||| || |||||||| | ||||| Sbjct 195 GATAAAGAAAGTGTTAAACGCACACTATATAAAGCGATGTCTATGGGCTTGTGAGGGTTC 254 Query 12802 GAGTCC 12807 || ||| Sbjct 255 GACTCC 260 Score = 113 bits (124), Expect = 1e-20 Identities = 77/85 (91%), Gaps = 4/85 (5%) Strand=Plus/Plus Query 12958 GAGGGTTCGACTCCCTCGCTCGCTGTTAGTCTGTCGTGACTAGGTAACtttttttCGACA 13017 |||||||||||||||||||||||||||||||||||||||||||| || ||||| |||| Sbjct 247 GAGGGTTCGACTCCCTCGCTCGCTGTTAGTCTGTCGTGACTAGGAAA---TTTTTTGACA 303 Query 13018 C-CGCATCGCTGACAGACCGATGCA 13041 | || ||||||||||||||||| || Sbjct 304 CTCGTATCGCTGACAGACCGATACA 328 >seq30831 Length=459 Score = 149 bits (164), Expect = 2e-31 Identities = 96/105 (91%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 33574 ATGCCCTCGGCTAGCGAAGTCACAACTGCTGATTATCCAAGTTTCATCGGACAATATACA 33633 ||||| || |||||||||| |||||||||||| |||||||||||||||||||| || ||| Sbjct 105 ATGCCATCAGCTAGCGAAGCCACAACTGCTGACTATCCAAGTTTCATCGGACACTACACA 46 Query 33634 AACTATACACAAGTAGATAGTCCTAATCCTCGAGATTACACTTGG 33678 ||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 45 GACTTTACACAAGTAGATAGTCTTAATCCTCGAGATTACACTTGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133294232543400