Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_022967.1 Length=92495 Score E Sequences producing significant alignments: (Bits) Value seq66202 96.9 2e-15 seq57034 95.1 7e-15 seq56781 89.7 3e-13 >seq66202 Length=972 Score = 96.9 bits (106), Expect = 2e-15 Identities = 222/330 (67%), Gaps = 6/330 (2%) Strand=Plus/Minus Query 74629 CAAGAGACCTTTAGCCGACTTCTTCTTGCTGTCAGTTTTCGGGTCTTTGAAGATCGCGAT 74688 ||||| ||||| ||| ||||| ||||| |||||||| || ||||| | | ||| Sbjct 953 CAAGAAACCTT-AGCTGACTTTTTCTTAACATCAGTTTT-GGCTCTTTACTCACCAGGAT 896 Query 74689 ACCTTCACCATTCACTTCGGTGTAG--GTGGCTTTCACTGCAAATCCGAAAGTATCCCGG 74746 ||||||||| | | || | || ||||| |||||| || || || || || Sbjct 895 CTCTTCACCATCAA--TGATTGAACCAGTTGCTTTACATGCAAAACCAAAGGTGTCACGT 838 Query 74747 GTGTTGCACTGATAGGTGTAGCTACCAACTCCGAACACTACGTTCAGGGAAGCAAAACCT 74806 || ||| | | || || |||||||||| ||||| || | || || ||||||||| Sbjct 837 GTATTGTAGTTGTAAGTATAGCTACCAATACCGAATACAATATTACTTGATGCAAAACCT 778 Query 74807 TTCTCCTTCAAGCGCTCCAAGATTTTAGCTGCTCGGCGAGTTGTAATGGAATCCCCATAG 74866 || | | |||||| || ||||||| || || || || || ||||| |||||| Sbjct 777 TTAGCTTCCAAGCGTTCAAAGATTTCAGTGGCGCGTTTCAGAGTGATTGAATCACCATAG 718 Query 74867 ATCAATCCGATATGAGAATCGAGCATCTTATAACCTGCCTCGTTCACAGTACCTCCGAAG 74926 || | || | || | ||| || | ||| |||||| ||| || ||| || ||| Sbjct 717 ATTACACCAACGTGTGTATCAAGAACCTTGTAACCTTTAGAGTTAACTTCACCACCAAAG 658 Query 74927 GTTTCCCACAGAACTTGGATGGCTCCTTTT 74956 ||||||||||||| || | | ||| ||| Sbjct 657 ATTTCCCACAGAACCTGAACAGATCCCTTT 628 >seq57034 Length=296 Score = 95.1 bits (104), Expect = 7e-15 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 46635 CACAAGCAGGTGGTTAACCGTCTCCTTGAGCCGTTCCAGATGATGAAGACCGTTGTTACA 46694 ||||||||| | || || ||||| |||| || |||||||||||||||||||| | || Sbjct 264 CACAAGCAGATTGTGAATCGTCTTGTTGAACCATTCCAGATGATGAAGACCGTCATGACT 205 Query 46695 GCCACGGAACTAGATAACTTCTTCTACCTGCGTTGCCATAAAGACGCACAACCGGAGATC 46754 || || || || ||||| ||||||| || || | ||| ||| |||||||| |||||| Sbjct 204 GCAACCGAGCTTGATAATTTCTTCTGGCTACGCTTGGATACAGATGCACAACCTGAGATC 145 >seq56781 Length=1399 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 46635 CACAAGCAGGTGGTTAACCGTCTCCTTGAGCCGTTCCAGATGATGAAGACCGTTGTTACA 46694 || || ||| | || |||||| | | || |||||||||||||||||||| || | ||| Sbjct 65 CATAAACAGATTGTGAACCGTTTGGTCGAACCGTTCCAGATGATGAAGACTGTCATGACA 124 Query 46695 GCCACGGAACTAGATAACTTCTTCTACCTGCGTTGCCATAAAGACGCACAACCGGAGAT 46753 || || ||||| ||||||||||||| | |||| || |||| |||||||| || || Sbjct 125 GCAACAGAACTGGATAACTTCTTCTGGTTACGTTTAGATGAAGATGCACAACCTGAAAT 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295389366344800