Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_022974.1 Length=88255 Score E Sequences producing significant alignments: (Bits) Value seq29230 100 2e-16 seq27013 89.7 3e-13 seq39015 84.2 1e-11 >seq29230 Length=2423 Score = 100 bits (110), Expect = 2e-16 Identities = 120/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 23129 AGATCGACAGGGACAGCGCCCTGGAGTCCTGCTCCTGGGGGATGTTCCAGATCATGGGCT 23188 ||||||| || | |||| |||||||| ||| |||||| |||||||| ||||||||| Sbjct 1204 AGATCGATGAGGTCTGCGCGCTGGAGTCGTGCAGCTGGGGCCTGTTCCAGGTCATGGGCT 1263 Query 23189 ACCACTGGAAGCTGATGGGGTACCCTACCCTTCAAGCTTTCGTAAACGCCATGTACGCCA 23248 |||||||| || |||| || | | | | || | ||||| | | |||| | |||| Sbjct 1264 ACCACTGGCAGGACCTGGGCTATGCCAGCGTCCAGGACTTCGTCACCCGCATGCAGGCCA 1323 Query 23249 GCGAAGGAGCCCAGATGGACGCCTTCTGCCGGTTCATCAAGGC 23291 ||||| | | ||| ||||||| ||| ||| ||| ||||||| Sbjct 1324 GCGAAAGCGAGCAGCTGGACGCATTCGTCCGCTTCGTCAAGGC 1366 >seq27013 Length=32742 Score = 89.7 bits (98), Expect = 3e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 42430 CACAAGCAGGTTGTCAACCGGGTGCTTGAGCCTTTCCAGATGATGAAGACGGTAGTGACC 42489 ||||| ||| |||| ||||| || |||| ||||||||||||||||| || || |||| Sbjct 8916 CACAAACAGATTGTGAACCGCTTGGTTGAACCTTTCCAGATGATGAAAACTGTGATGACA 8975 Query 42490 GCTACCGAGTGGGAGAACTTCTACTGGCTCCGTGATCACGAAGACGCCCAGCCGGAG 42546 || || ||| ||| ||||||| |||| | ||| ||||||| || ||||| ||| Sbjct 8976 GCAACAGAGCTGGATAACTTCTTCTGGTTGCGTTTGGACGAAGATGCACAGCCTGAG 9032 >seq39015 Length=669 Score = 84.2 bits (92), Expect = 1e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 23113 CTGGCCCGTGCCGTAAAGATCGACAGGGACAGCGCCCTGGAGTCCTGCTCCTGGGGGATG 23172 ||||| |||||||| |||||| | || ||| ||||| ||| ||| | |||| | Sbjct 541 CTGGCGCGTGCCGTCGCCATCGACCGTGAAGCCGCGCTGGAATCC-GCTAGTTGGGGGTC 599 Query 23173 TT-CCAGATCATGGGCTACCACTGGAAGCTGATGGGGTACCCTACCCTTCAAGCTTTCGT 23231 || |||||||||||| ||||||||||| | |||| |||||| ||||||| | ||| | Sbjct 600 TTTCCAGATCATGGGATACCACTGGAAAGCGCTGGGCTACCCTTCCCTTCAGTCATTCAT 659 Query 23232 AAACGCCATG 23241 |||| |||| Sbjct 660 CAACGACATG 669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 281842912752800