Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_022986.1 Length=93147 Score E Sequences producing significant alignments: (Bits) Value seq57034 95.1 7e-15 seq56781 89.7 3e-13 seq66202 87.8 1e-12 >seq57034 Length=296 Score = 95.1 bits (104), Expect = 7e-15 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 47226 CACAAGCAGGTGGTTAACCGTCTCCTTGAGCCGTTCCAGATGATGAAGACCGTTGTTACA 47285 ||||||||| | || || ||||| |||| || |||||||||||||||||||| | || Sbjct 264 CACAAGCAGATTGTGAATCGTCTTGTTGAACCATTCCAGATGATGAAGACCGTCATGACT 205 Query 47286 GCCACGGAACTAGATAACTTCTTCTACCTGCGTTGCCATAAAGACGCACAACCGGAGATC 47345 || || || || ||||| ||||||| || || | ||| ||| |||||||| |||||| Sbjct 204 GCAACCGAGCTTGATAATTTCTTCTGGCTACGCTTGGATACAGATGCACAACCTGAGATC 145 >seq56781 Length=1399 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 47226 CACAAGCAGGTGGTTAACCGTCTCCTTGAGCCGTTCCAGATGATGAAGACCGTTGTTACA 47285 || || ||| | || |||||| | | || |||||||||||||||||||| || | ||| Sbjct 65 CATAAACAGATTGTGAACCGTTTGGTCGAACCGTTCCAGATGATGAAGACTGTCATGACA 124 Query 47286 GCCACGGAACTAGATAACTTCTTCTACCTGCGTTGCCATAAAGACGCACAACCGGAGAT 47344 || || ||||| ||||||||||||| | |||| || |||| |||||||| || || Sbjct 125 GCAACAGAACTGGATAACTTCTTCTGGTTACGTTTAGATGAAGATGCACAACCTGAAAT 183 >seq66202 Length=972 Score = 87.8 bits (96), Expect = 1e-12 Identities = 165/243 (68%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 75564 GTTGCTTTCACTGCAAATCCGAAAGTGTCTCGGGTGTTGCACTGGTAGGTGTAACTGCCA 75623 |||||||| |||||| || || ||||| || || ||| | | ||| || || || ||| Sbjct 870 GTTGCTTTACATGCAAAACCAAAGGTGTCACGTGTATTGTAGTTGTAAGTATAGCTACCA 811 Query 75624 ACTCCAAACACTACGTTCAGGGAAGCGAAACCTTTCTCCTTCAAGCGCTCCAAGATTTTA 75683 | || || || | || || || |||||||| | | |||||| || ||||||| | Sbjct 810 ATACCGAATACAATATTACTTGATGCAAAACCTTTAGCTTCCAAGCGTTCAAAGATTTCA 751 Query 75684 GCTGCACGGCGAGTTGTAATGGAATCTCCATAGATCAGACCGATATGAGAATCGAGCATC 75743 | || || || || ||||| |||||||| | ||| | || | ||| || | | Sbjct 750 GTGGCGCGTTTCAGAGTGATTGAATCACCATAGATTACACCAACGTGTGTATCAAGAACC 691 Query 75744 TTATAACCTGCTTCGTTCACAGTGCCGCCGAAGGTTTCCCACAGAACTTGGATAGCTCCT 75803 || |||||| ||| || || || ||| ||||||||||||| || | || ||| Sbjct 690 TTGTAACCTTTAGAGTTAACTTCACCACCAAAGATTTCCCACAGAACCTGAACAGATCCC 631 Query 75804 TTT 75806 ||| Sbjct 630 TTT 628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 297472453076400