Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2641 140 2e-28 seq28556 96.9 3e-15 >seq2641 Length=263 Score = 140 bits (154), Expect = 2e-28 Identities = 148/194 (76%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||| ||| || || |||||||| |||||||| ||||| |||| ||| ||| | Sbjct 234 CGAAGAACCAGATGCAGAGTAGATTCTTTCTGAATGTTGTAATCGGCAAGGGTTCGACCA 175 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | || || |||||| | || | || ||| ||||| || ||||||||||| ||| Sbjct 174 TCTTCCAACTGCTTACCAGCAAAGATGAGTCGTTGTTGATCGGGGGGAATACCCTCCTTG 115 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| ||||| ||||||| | || | ||| || ||| ||| |||||||| || ||| Sbjct 114 TCTTG-AATTTGGTTTTGACATTGTCGATAGTATCCGAAGATTCAACTTCAAGGGTGATA 56 Query 29752 GTTTTGCCAGTTAA 29765 || ||||| || || Sbjct 55 GTCTTGCCGGTCAA 42 >seq28556 Length=388 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || ||||| ||||| || || || ||||||||||| ||||| | | ||| || | Sbjct 68 CGAAGGACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAGAGGGTACGGCCA 127 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || || || | || | | ||||| ||||| ||||| || |||||| Sbjct 128 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCTTTG 187 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || |||||| | || | || || ||| |||||||| || || || Sbjct 188 TCCTGGATCTTCGACTTGACATTGTCAATGGTATCCGAAGACTCTACTTCTAGCGTGATG 247 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || ||||| || | ||| || || || || |||||| Sbjct 248 GTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATT 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384607459872300