Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_023498.1 Length=62466 Score E Sequences producing significant alignments: (Bits) Value seq2902 188 3e-43 seq37656 93.3 2e-14 seq75989 91.5 6e-14 >seq2902 Length=689 Score = 188 bits (208), Expect = 3e-43 Identities = 324/465 (70%), Gaps = 19/465 (4%) Strand=Plus/Plus Query 56167 GCAGCTCGGCACCCTCGGCGGCGGTAACCATTTCATCGAGCTGTGCCTCGATCACCTTGA 56226 |||||| |||||||||||| || ||||| ||| ||||| ||| | ||| | || | Sbjct 191 GCAGCTGGGCACCCTCGGCTCGGGCAACCACTTCGTCGAGGTGTCCTCCGACGAGCTCGG 250 Query 56227 CCGGGTGTGGCTGTTCCTGCACTCCGGTTCGCGTGGCGTCGGCAACAAGATCGCCCAGCG 56286 |||||||||||||||||| |||||||| ||||| || || || ||| || | || ||||| Sbjct 251 CCGGGTGTGGCTGTTCCTCCACTCCGGCTCGCGCGGGGTGGGGAACCAGCTGGCGCAGCG 310 Query 56287 GCATATCTCTGCGGCGCAGGGGTATTGCCAGGCGCAAGGGCTG------CACGTCCCGCA 56340 ||| ||| | |||||||| | |||||| | ||| | || | ||| | Sbjct 311 GCACATCCGGGTGGCGCAGGAG------CAGGCGGCACGGCGGTTTTACGACCTGCCGGA 364 Query 56341 CCGCGACCTCGCGTACCTCGTCGAGGGCACTGTCGAGTTCGACCGCTACCTCGTCGAGCT 56400 |||||||||||| |||||||| ||||| ||||||||| |||| ||| | || Sbjct 365 CCGCGACCTCGCCTACCTCGTGGAGGGGGAGCCGGAGTTCGACGCCTACGTCGAGGCCCT 424 Query 56401 GCGGTGGGCGCAGCGGTTCGCGTACTACAACCGCGCCGAGATGATGGACCGTTTCG-CGC 56459 | |||||||||||| ||||| | |||||||| |||||||||||||| ||| ||| Sbjct 425 CCTGTGGGCGCAGCGCTTCGCCGCCCTCAACCGCGAGGAGATGATGGACCGCGTCGTCGC 484 Query 56460 AGGCGTTCCGGCATTGG--ATCGGCGCCGACGCCCCGATCGACGAGCTGGTCGTCGAGAC 56517 ||| || || || ||||| | || ||| |||| | || ||||| Sbjct 485 -CGCGCTC--GCCGAGGCCCTCGGCCTGGGCGGGCCGGAGGACGTCGTCCGCGAGGAGAC 541 Query 56518 GATCAACACGCATCACAACTACACGCAGAAGGAGCTGCACGGCGGCCGTGAGGTGTGGTT 56577 |||| | || ||||||||||| ||| ||| ||| |||||||||||| | Sbjct 542 GATCGGCTGCCACCACAACTACACCGCCCGCGAGACCCACTACGGGCGTGAGGTGTGGCT 601 Query 56578 GACCCGCAAGGGTGCGATCGACGCGCACGAGGGTGTGCGGGGCCT 56622 | ||||||| || || ||| ||| | |||||| | || ||||| Sbjct 602 GTCCCGCAA-GGCGCCATCAGCGCCCGCGAGGGCGAGCTCGGCCT 645 >seq37656 Length=523 Score = 93.3 bits (102), Expect = 2e-14 Identities = 91/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 56164 TGAGCAGCTCGGCACCCTCGGCGGCGGTAACCATTTCATCGAGCTGTGCCTCGATCACCT 56223 || |||||| ||||| | ||||| || ||||| |||||||||||||||||||| | Sbjct 365 TGGGCAGCTGGGCACGTTGGGCGGTGGCAACCACTTCATCGAGCTGTGCCTCGACGAAGA 306 Query 56224 TGACCGGGTGTGGCTGTTCCTGCACTCCGGTTCGCGTGGCGTCGGCAACAAGATCG 56279 | ||||||||| || | ||||||| ||| ||||| ||||||||||| ||||| Sbjct 305 GGCGCGGGTGTGGGTGATGCTGCACT-CGGGTCGCGCGGCGTCGGCAATGCGATCG 251 >seq75989 Length=485 Score = 91.5 bits (100), Expect = 6e-14 Identities = 110/153 (72%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 55837 GCACGTGGCGCTGATGCCCGACGCGCATTACGGCAAGGGCTCAAGCGTCGGCACGGTGAT 55896 |||| ||||| |||||||||||| |||| ||||||||||| | | |||||| ||||| Sbjct 245 GCACCTGGCGGTGATGCCCGACGTGCATCTGGGCAAGGGCTCGACCATCGGCAGCGTGAT 186 Query 55897 CCCGACTGAGGGCNNNNNNNNNNNNNNCGCGGTGGGCGTCGATATCGGTTGCGGCATGAT 55956 ||| | | |||| || || ||||| || ||||| ||||| ||||| Sbjct 185 CCCCTCGGTGGGCGCGATCATCCCTGCTGCCGT-GGCGTGGACATCGGCTGCGGGATGAT 127 Query 55957 CGCCGCGCGCACCGTGTACACGGCCGCCGACCT 55989 ||||||||||||| | || | ||||||||| Sbjct 126 CGCCGCGCGCACCACGCTGACCGGCGCCGACCT 94 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199449164714100