Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_023568.1 Length=246964 Score E Sequences producing significant alignments: (Bits) Value seq40411 89.7 8e-13 seq38626 87.8 3e-12 >seq40411 Length=1793 Score = 89.7 bits (98), Expect = 8e-13 Identities = 199/299 (67%), Gaps = 0/299 (0%) Strand=Plus/Plus Query 188159 ACAGATGCATGGAAAGAACTGACGGGCTACGGTTTCAGTCTGTACAGTACACCAAGTGAA 188218 || || || ||||||| |||||||| || || || || ||||||||||| || ||| Sbjct 400 ACCGACGCCTGGAAAGCGGAAACGGGCTATGGCTTTAGCCTCTACAGTACACCCAGCGAA 459 Query 188219 TCGCTGTGTGATCGTTTCTGTCGTCTCGACCAAGAGAAATACGGTGTCATTACAGGTATC 188278 | ||||| |||||||| || || || | ||| ||||| | | ||| | Sbjct 460 AACTTATGTGACCGTTTCTGCCGACTGGATGCGGCTGAATTTGGTGTGGTAAAAGGCGTG 519 Query 188279 AATGACAAAGACTATTACACAAACTCGTTTCACTTAGACGTGTTCAAGAAAGTTAACCCA 188338 | ||||||| |||||||| ||| || || | ||||| ||||| || || || Sbjct 520 ACCGACAAAGGTTATTACACCAACAGCTTCCATCTGGACGTTGAGAAGAAGGTGAATCCT 579 Query 188339 TTTGAGAAAATTGATTTTGAAGCTGCATACCCAATTCATGCAAACGGTGGTTTCATCTGT 188398 | || ||||| |||||||||||| | || || | | || || ||||| |||||| Sbjct 580 TACGAAAAAATCGATTTTGAAGCTCCCTATCCGCCACTCTCCAATGGCGGTTTTATCTGT 639 Query 188399 TATGCTGAGTTCCCGAATATGCGAGATAACATCAAAGGTCTAGAGCGCGTATGGGATTA 188457 || | || | || ||| ||| | ||| | || | || || ||| |||||||| Sbjct 640 TACGGCGAATATCCCAATGTGCAGCACAACCTTAAGGCGCTGGAAGACGTCTGGGATTA 698 >seq38626 Length=1471 Score = 87.8 bits (96), Expect = 3e-12 Identities = 244/368 (66%), Gaps = 10/368 (3%) Strand=Plus/Plus Query 186908 GAGAATGCAAATAAAGATTCGAAAGTAATCCCTACAATGCGTGACTTAGTAGCTGGCACA 186967 || ||||| |||||||| ||||| ||||| || || || || | || || | Sbjct 640 GAAAATGCCAATAAAGACAGCAAAGTGATCCCGACCCAACGCGATTTGCTGGCCGGGATT 699 Query 186968 GTGTCGAAACATTACGCACTTGAAGACTATC-TACCGAAGCATATTGCAGATGCACAT-A 187025 ||| ||||||||||||| | | || ||| | || || | | | || ||| | Sbjct 700 GTGGCGAAACATTACGCCCA-GCAGCAAATCCTGCCTCGTGATGTGGTTCAGGCGCATGA 758 Query 187026 TCGACGGCGATATTCATTTTCATGACCTTGACTACAGCCCATTATTCCCGCAATTCAACT 187085 || |||||| || |||| ||| || || || ||| || || ||||| || |||| Sbjct 759 GCG-CGGCGAGATCCATTATCACGATCTCGATTACGCGCCTTTCTTCCCCATGTTTAACT 817 Query 187086 GTATGCTTATTGATATCAAAGGCATGTTTGAAGGCGGTTTCAAAATGGGTAATGCTGAAA 187145 | ||||| || ||| | ||||||||| | |||||| |||||||| || || || | Sbjct 818 GCATGCTGATCGATCTGAAAGGCATGCTGACCAACGGTTTTAAAATGGGCAACGCGGAGA 877 Query 187146 TCGAAGAACCAAACAGTATTAGCACTGCTGCCACTGTTGTAACT---CAGATTATTCAGC 187202 |||| || | ||| || | ||||||| || ||| || || ||| | Sbjct 878 TCGAGCCGCCCAGGTCGATTG---CTACCGCCACTGCGGTGACTGCGCAAATCATTGCCC 934 Query 187203 AAGTAAGTAGCCATATCTACGGCGGTAACACGATCAATAGAATCGACGAAGTCCTAGCAC 187262 | || ||||||||||| ||||| | |||| | ||| | || ||||| || || |||| Sbjct 935 AGGTTGCCAGCCATATCTATGGCGGAACCACGCTGAATCGTATTGACGAGGTGCTGGCAC 994 Query 187263 CTTATGTT 187270 | |||||| Sbjct 995 CCTATGTT 1002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788869832112000