Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_023579.1 Length=75568 Score E Sequences producing significant alignments: (Bits) Value seq31376 93.3 2e-14 >seq31376 Length=18204 Score = 93.3 bits (102), Expect = 2e-14 Identities = 240/363 (66%), Gaps = 2/363 (1%) Strand=Plus/Minus Query 69735 TAACCAGATACAGATGTACTCAGGCCAGCACCCTGTGCAAAACGACA-CTTGATCTGAAT 69793 ||||| || ||| | ||||| | |||||||||| | || | ||| | | ||||| | Sbjct 6334 TAACCCGAAGCAGTTTCACTCAAGGTAGCACCCTGTTCGAATCTACAACCTATTCTGA-T 6276 Query 69794 GATCTTCGCATACTGAGCACCAGAAGGCAGAACGGAGTTTTCTTGAGTCACGTTTTTCAG 69853 | || | ||||| | | || || | || |||||||||| | || || ||||| Sbjct 6275 AAGTTTTGAATACTTAATGGCTGATGGATTAGTGGCGTTTTCTTGAATAACTTTATTCAG 6216 Query 69854 TAACCAGCCGCCCTGTGAAACATCGAAGCCCTGATTACAGTGGTCAAACCAAACGTCTTC 69913 | ||| | ||||| |||| |||||| | | ||| |||||||||||||| | | Sbjct 6215 TGTCCAATCACCCTGAGAAATATCGAATGGATACTCACAATGGTCAAACCAAACATTATT 6156 Query 69914 CATAACCGACTGACCAGCACGAATGGCACTGAAGGCATATTCGCCAGTGTGTCCTTCGAA 69973 ||| || | || | |||||| ||||| |||||||| ||||| | || | || Sbjct 6155 CATCACAGCTTGGGTGGTACGAATCAGACTGACAGCATATTCACCAGTATTACCGTTAAA 6096 Query 69974 GTTGGCATCTGTCAGCTTGATAGCAGTTGGGTGATCCCATGCACCGGGGTTTTCATTCGA 70033 ||| || | | | | || || ||| || ||||||||||| || |||| || || Sbjct 6095 GTTAGCGTTAGATATTTCAATTGCTGTTAAATGGTCCCATGCACCTGGACTTTCGTTTGA 6036 Query 70034 CCAGTCTGTACGGAAGAATGATGCTCGACCTTGAGAAGAGTAAATCTGATCCAAGGTAGT 70093 ||| | | || |||| ||| || || ||| ||||||||||| || |||| Sbjct 6035 CCAAGTTCCCCAGATAAATGCAGCTTTACAACGATAAGTATAAATCTGATCAAATTTAGT 5976 Query 70094 ATC 70096 ||| Sbjct 5975 ATC 5973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241308984280700