Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_023593.1 Length=76184 Score E Sequences producing significant alignments: (Bits) Value seq27013 82.4 4e-11 >seq27013 Length=32742 Score = 82.4 bits (90), Expect = 4e-11 Identities = 214/325 (66%), Gaps = 1/325 (0%) Strand=Plus/Minus Query 43647 GTCACCCATGCAGAACAGCTGGGATGTTTCACCCAAGCGAGTCATAATAGAGAATGCTTC 43706 |||||| | |||| |||| ||| |||||| | || |||| ||| | | | || || Sbjct 17575 GTCACCTAAACAGATTAGCTTGGAGTCTTCACCAAGTCGCGTCAGAATGGTGTAGGCCTC 17516 Query 43707 ATCTTTGGTTGTATTCTGGAACTCATCCACAATAACAATGGCATCATTGAAAGAGCGACC 43766 |||| || | ||| || ||||| | |||||| | | | | || || || Sbjct 17515 ATCTGGTGTAACAAGCTGAAATTCATCGATAATAACCACAGAGTTCTCAAAGCTCCGTCC 17456 Query 43767 ACGGAGATATTCCAGAGGCACAAACTCAATGTTCCCATTACCAAGCTGACATTCATAGAA 43826 ||| | ||| |||| || ||||| ||||| || ||| |||| | || || || Sbjct 17455 ACGTACATACTCCAATGGGACAAATTCAATTTTTT-ATTGTTAAGCGCAGTCTCGTAAAA 17397 Query 43827 ACCTTTACCATACCGCTGAGTGATTACATCAACAATAGGCATCAGGTATGGTTCGAACTT 43886 ||||| |||||||| || | ||||| || |||| | ||||| ||||| ||||| Sbjct 17396 ACCTTGCCCATACCGACCTGTAAGAACATCCACCATAGCTAAAAGGTAAGGTTCAAACTT 17337 Query 43887 ATCACGAAGCCCACCCGGAAGTAATCCAAGAGAGTTACCCATGCCAACAGAGGGTCGGCT 43946 ||||| | |||||| | | || || | || ||||||||||| | |||||| Sbjct 17336 GTCACGCATCCCACCTTTCAACATCCCGAGCGTATTTCCCATGCCAACGCTTGCTCGGCT 17277 Query 43947 AATGATAATCTTTTGAATCTTACCA 43971 |||||||| | |||||| ||| Sbjct 17276 CATGATAATTCGATCAATCTTGCCA 17252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243277053953500