Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq35690 250 3e-61 seq33089 127 3e-24 >seq35690 Length=1912 Score = 250 bits (276), Expect = 3e-61 Identities = 339/472 (72%), Gaps = 8/472 (2%) Strand=Plus/Minus Query 87399 GAAACGCTGTAGCGCGTCGGAAAGTCCACTTTGGACCCCTCTCGGTAAATCACACTGAGC 87458 ||||||| |||||||| | || || | ||||| || ||||| ||||| | Sbjct 1775 GAAACGCGCCAGCGCGTCTGCGAGACCGGAAGGCACCCCAGCGGGCAAATCGCACTGGGT 1716 Query 87459 CACGTCTCCGTTAACAATCACGGTCACGTTCTCACCCAGACGTGTCAGGAACATTTTCAT 87518 | || |||||||||||||| || || || || || || || ||||||||||||||||| Sbjct 1715 AATATCGCCGTTAACAATCACCGTGACATTTTCGCCAAGGCGGGTCAGGAACATTTTCAT 1656 Query 87519 CTGTGCCTTGGTTACGTTCTGGGCTTCGTCCAGGATAACTACCGCGTTCTCAAACGTGCG 87578 ||| || || |||||||| ||||||||||| || |||||||| || ||||| ||||| Sbjct 1655 CTGCGCAGCCGTCACGTTCTGCGCTTCGTCCAGAATCACTACCGCATTTTCAAAGGTGCG 1596 Query 87579 GCCACGCATATACGCGAAGGGAGCAATTTCCACCTTCTTCACATCCGGGCGCAAGCAGTA 87638 ||| |||||||| || || || ||||||||||| || | ||||| |||| || || Sbjct 1595 GCCGCGCATATAGGCAAAAGGCGCAATTTCCACTTTGCCGATTTCCGGACGCAGACAATA 1536 Query 87639 CTGAAGGAACGTACCACCAAGGCGTTTCTCCAGGATGTCTTGAACCGGGCGGAAATACGG 87698 || | || | | ||||| ||||| |||| ||||| | ||||||||||||||| || Sbjct 1535 TTGCATAAAGGATGCGCCAAGACGTTTAACCAGAATGTCGTAAACCGGGCGGAAATAGGG 1476 Query 87699 GGCGAATTTCTCGCTGATGTCCCCAGGCAAGAAGCCCAGGTTCTCACCGGACTCTAAGAC 87758 |||||||||||| ||| || || || | ||| ||||| | |||| | | || || || Sbjct 1475 GGCGAATTTCTCTGAGATATCACCGGGAAGGAATCCCAGATCCTCATCCGCCTGTAGCAC 1416 Query 87759 AGGACGCGTCACGATGATGCGCTCCACCTCTTTATCCAGCAATGCTTTGGCCGCGTGCGC 87818 || ||||| ||||| || | || | || |||| | || || | || || | ||| Sbjct 1415 CGGGCGCGTAACGATAATCCTGTCGATATCCTTATGAATCAGGGCCTCTGCTGCTTTCGC 1356 Query 87819 AGTTGACAGGAAT----GTTTTACCACAACCGGCTTCACCCGTTGCAAAGAT 87866 || || ||| ||||| || || || ||||| ||||| || ||||| Sbjct 1355 AG----CACTAATCCAGGTTTTGCCGCAGCCCGCTTCGCCCGTGGCGAAGAT 1308 >seq33089 Length=3771 Score = 127 bits (140), Expect = 3e-24 Identities = 201/288 (70%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 93443 TGCTGGATACCCTTGACTCGAAGATTGACCAGTGGTACGCCAGTGGTTGTACTGGCGATG 93502 |||||||||| || |||| || |||||||||||||||||| | ||||| || |||| Sbjct 3394 TGCTGGATACGCTGGACTGTAAAATTGACCAGTGGTACGCCTCGGCCTGTACCGGTGATG 3335 Query 93503 TCATCAAAGGGTATTGGTCGGGGCGTGCCGCGGGCGTATGGGACCACATGACGGCGGTGG 93562 |||| | | ||||| || | |||| ||||| |||| |||||| | | Sbjct 3334 TCATTCAGGCCGGCTGGTCAGGACAGAAGAAGGGCAACTGGGATCACAGCACGGCGATTG 3275 Query 93563 AGCTGAGTAACTTTAACGTCCAGAACTGTCGGGGCGGAAAGGTACTGAACTTGCCGCGTT 93622 |||| ||||| || | ||| ||||| || || ||||| ||||| ||||||| | Sbjct 3274 AGCTTTCCAACTTCAATGCGCAGCACTGTAAAGGTGGCAAGGTCCTGAATCTGCCGCGCT 3215 Query 93623 GCACGCAATCCTTCATCTGGAACGGCTGGATTGAGCACAGTGACAACCCAGGCGACCTGT 93682 ||| || || | || |||||||||||||| ||| | ||||| || ||||| | | Sbjct 3214 GCAGTCAGTCGCTGATTCATAACGGCTGGATTGAACACTGCGACAATCCCGGCGATATCT 3155 Query 93683 CGAACGGCCAGTGGATTATCAACGGACTGAACATCGAAGACTGTAAAA 93730 | || || ||||||||||| | | || | | | ||||| || |||| Sbjct 3154 CCAATGGTCAGTGGATTATTGATGCGCTCAGCCTGGAAGATTGCAAAA 3107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 697419025612000