Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_023695.1 Length=52481 Score E Sequences producing significant alignments: (Bits) Value seq77134 140 1e-28 >seq77134 Length=829 Score = 140 bits (154), Expect = 1e-28 Identities = 174/238 (73%), Gaps = 8/238 (3%) Strand=Plus/Minus Query 41770 CCGTAGAGCCAGGCGATGGAGTCGCGGATCTCGAAGCCCGCGTCCTCGATGGCCACGGTC 41829 ||||| | ||||||||| ||||||||||||||| || |||||||||||| |||| | Sbjct 691 CCGTAAACCCAGGCGATCATGTCGCGGATCTCGAACCCGGCGTCCTCGATGCGGACGGCC 632 Query 41830 AGCCGGTGCCAGGTGCGGGAGCCACCGAAGGCGAGCAGGTGCCCACCGGGCTTGAGGACC 41889 | |||||| |||||||| ||| | || || |||||||| || || |||||||| || Sbjct 631 ATGCGGTGCTGGGTGCGGGTGCCGGCAAACGCCAGCAGGTGGCCGCCAGGCTTGAGCACG 572 Query 41890 CGCAGGCATTGCTCCCACATCTCGACATCGAAAGCGATGCCCG-AGCCGTCCCACTTCTT 41948 |||||||| | |||| |||||| || || || | |||||| | | Sbjct 571 CGCAGGCACTCAGCCCAAATCTCG-------GTGCTTGGCACGTCGTAGTCCCAGCGCCT 519 Query 41949 GCCCATGAATCCCAGTTCGTAGGGCGGGTCGGTGACGATGGAGTCGACGCTGTTGTCT 42006 |||||||| |||| |||| ||||| ||||||||||| || ||||| ||||||| Sbjct 518 ACCCATGAACGCCAGGCCGTATGGCGGATCGGTGACGATTGAATCGACCGAGTTGTCT 461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167557933729800