Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_023699.1 Length=59016 Score E Sequences producing significant alignments: (Bits) Value seq77134 105 3e-18 >seq77134 Length=829 Score = 105 bits (116), Expect = 3e-18 Identities = 112/145 (77%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 43881 CGAGATGTGGAAGCAATGCCTGCGGGTCCTCAAACCCGGTGGGCACCTGCTCGCCTTCGG 43940 |||||| ||| | |||||||| || ||||| || || || |||||||| || || | Sbjct 548 CGAGATTTGGGCTGAGTGCCTGCGCGTGCTCAAGCCTGGCGGCCACCTGCTGGCGTTTGC 607 Query 43941 CGGCTCCCGCACCTGGCACCGGCTCGC-GTCGGCCATCGAGGACGCGGGCTTCGAGATCC 43999 |||| |||||||| |||||| | || ||| || ||||||||||| || |||||||||| Sbjct 608 CGGCACCCGCACCCAGCACCGCATGGCCGTCCGC-ATCGAGGACGCCGGGTTCGAGATCC 666 Query 44000 GCGACTCCATCGCCTGGCTCAACGG 44024 ||||| ||||||||| | |||| Sbjct 667 GCGACATGATCGCCTGGGTTTACGG 691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188437576330800