Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_023700.1 Length=34553 Score E Sequences producing significant alignments: (Bits) Value seq74251 168 1e-37 seq60360 138 2e-28 >seq74251 Length=708 Score = 168 bits (186), Expect = 1e-37 Identities = 327/471 (69%), Gaps = 30/471 (6%) Strand=Plus/Minus Query 648 CATGAAATCAAGGCGCTGCGCCCGTTCATTCGCCGC--GACTTCACCAAGCTGCTCCCGA 705 || ||| ||||||| |||| || ||| || ||| ||| || || ||| |||| Sbjct 684 CAGGAACTCAAGGCCCTGCAACCTTTCCGCCGACGCTCGAC--CAAAAACCTGTTCCCCG 627 Query 706 CCGACGTCTATTCATGC--GACGGCCACACGTTCGACGCCGAGGTCCAGCACCCGATGCA 763 ||||||| ||| | |||||||||| ||||||||||||| || |||| || Sbjct 626 GGGACGTCT--TCACGGCGGACGGCCACAAGTTCGACGCCGAGATCATCAACCCTCTGAC 569 Query 764 CGGCCGGCCCTTCCGGCCGGAAATCACCACCATCATCGACATCCGTACCCGTCGAATTCC 823 |||| ||| | | | |||||||||||||| | |||||| || ||||| || | Sbjct 568 GGGCCAGCCGTACAGACCGGAAATCACCACGGTTATCGACGTCGCCACCCGGCGCGTAGT 509 Query 824 GGGATGGTCCACCGGCTTGGCCGAGTCGGCCCTGGTGGTGGTCGATGCCCTGCGTGACGC 883 ||| || |||| ||||||||||||| | | ||| | || | |||||||||||| Sbjct 508 GGGTATTTCGGTCGGCGAGGCCGAGTCGGCCATCGGTGTGCTGGACG-CCTGCGTGACGC 450 Query 884 CTGCACCAAGGGCG-GCATTCCGGCCATCTTCTACGTGGACAACGGCTCGGGCTACATCA 942 | | || || |||| || | |||||||||||||| || ||||||| | || Sbjct 449 CATC----CGGTCGTGCATGTTCGCTGTGTTCTACGTGGACAATGGTTCGGGCTTCGCCA 394 Query 943 ACCACATGATGCGCGACGAGGCGGTCGGCCTTATGGGCCGCCTGGGCATCGA-TATGAAG 1001 | ||| ||||||| ||||| ||| |||||||||| ||| |||| | Sbjct 393 ATGACACAGTGCGCGA------GGTCG------TGGACCGCCTGGGCGGCGACCATGACG 346 Query 1002 AACAGCCTGCCCTACAACAGCCAGGCGCG-GGGCGTGATTGAGCGCGTCCACCAGAGCCT 1060 || |||||||||||||||||||| || || | || | ||||| | |||||||| | | Sbjct 345 CACTCGCTGCCCTACAACAGCCAGGCACGCGGTCCTG-TCGAGCGAG-CCACCAGACCAT 288 Query 1061 GTGGATTCGGGCCGCCAAGGAACTGCCCGGCTACATCGGCGCCGACATGGA 1111 ||| | || |||||| | ||| || ||||||||||||| |||||||| Sbjct 287 TTGGGTCAATGCGGCCAAGAAGCTGACCAGCTACATCGGCGCAGACATGGA 237 >seq60360 Length=752 Score = 138 bits (152), Expect = 2e-28 Identities = 221/312 (71%), Gaps = 9/312 (3%) Strand=Plus/Plus Query 23303 GCGACCGGCAAGGCTGTTTCGGATACGGTCGCCGAGTTCTCCAAG---CTGGCCGACGAA 23359 || ||||||||||| || ||||| |||||||||||||| |||| ||||||||||| Sbjct 53 GCCACCGGCAAGGCCGTCTCGGAGACGGTCGCCGAGTT---CAAGCGCCTGGCCGACGAG 109 Query 23360 CCGGTCAAAGCCTCGCAACAGCTCAACGAGAAATATCACTACCTGACCGCCTCGGTTTAC 23419 ||| ||| |||||| ||| |||||| | || ||||||| |||||| |||| ||| Sbjct 110 CCGACCAAGGCCTCGGCCGCGCTGAACGAGCAGTACAACTACCTCACCGCCGCGGTCTAC 169 Query 23420 GAGCAGATAGCCGCCCTCGATCAGCAAGGCGATTCGCTGGGTGCCGCCCAACTGGCCATG 23479 || ||||| || || || |||| ||| | | | |||||| | |||||| | Sbjct 170 GACCAGATCCGGGCGCTGGAGGAGCAGGGCAACAAGACCGCCGCCGCCAACCTGGCCGAG 229 Query 23480 GACGCCTATAGCCAG-GCAATGGACGAGCGGGCGAGCCAGATCGTCGAGAACCTGGGCAC 23538 | ||||| ||| | || || | ||||| || | | ||| |||||||| || || Sbjct 230 GCGACCTAT-GCCGGCGCCTTGCAGGAGCGCGCCAAGAACATCAAGGAGAACCTCGGAAC 288 Query 23539 CCTGGAAACCGCTTGGAAGACCGTTGCCGGGGTGGCCAAGGGCGCCTGGGACGAAATGCT 23598 | | || | || ||||||| ||| || | | |||||||| |||||||||| ||||| Sbjct 289 CATTGAGTCTGCCTGGAAGAGCGTCACCAGCGGCGCCAAGGG-GCCTGGGACGCGATGCT 347 Query 23599 CGGCGTGGGCCG 23610 | | | ||||| Sbjct 348 CAACATCGGCCG 359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110277102429000