Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_023724.1 Length=62991 Score E Sequences producing significant alignments: (Bits) Value seq2902 120 1e-22 seq59741 82.4 3e-11 >seq2902 Length=689 Score = 120 bits (132), Expect = 1e-22 Identities = 344/514 (67%), Gaps = 30/514 (6%) Strand=Plus/Plus Query 52347 CAACTCGGCACACTCGGCGGCGGCAACCATTTCATCGAACTGTGCGTCGACCACCGCGGC 52406 || || ||||| |||||| |||||||| ||| |||| ||| | |||| | | |||| Sbjct 192 CAGCTGGGCACCCTCGGCTCGGGCAACCACTTCGTCGAGGTGTCCTCCGACGAGCTCGGC 251 Query 52407 TGCGTGTGGCTGTTCCTGCACTCCGGTTCACGTGGCGTCGGCAACAAGATCGCCCAGAAG 52466 | |||||||||||||| |||||||| || || || || || ||| || | || ||| | Sbjct 252 CGGGTGTGGCTGTTCCTCCACTCCGGCTCGCGCGGGGTGGGGAACCAGCTGGCGCAGCGG 311 Query 52467 CACATCAAGATCGCGCAAGCCGAATGCGACCTGTACGGCAT--CGAACTGCCCGGCGGCA 52524 |||||| | | |||| || | | ||| | | ||| | ||| ||||| | | || Sbjct 312 CACATCCGGGTGGCGC-AGGAGCAGGCGGCACG-GCGGTTTTACGACCTGCCGGACCGC- 368 Query 52525 ACAAGGATCTGGCGTACCTCGTCGAAGGTGAACCGTCGTTTGACGCGTACCTGAATGAGC 52584 || || || |||||||| || || || ||| ||| ||||| ||| | | | | Sbjct 369 -----GACCTCGCCTACCTCGTGGAGGGGGAGCCGGAGTTCGACGCCTACGTCGAGGCCC 423 Query 52585 TGCGTTGGGCGCAACAGTTCGCACTGTTCAACCGCGACGAAATGATGGACCG-GTACCGG 52643 | | |||||||| | ||||| |||||||||| || ||||||||||| || || Sbjct 424 TCCTGTGGGCGCAGCGCTTCGCCGCCCTCAACCGCGAGGAGATGATGGACCGCGT--CGT 481 Query 52644 CAGGCGTTCGCACGCTGGATGGGCATCGGTGTCGATGAGGCGCCGGTCGTCGAAATCGCC 52703 | | || ||| ||| | || | |||| | | | | || || ||||| || | Sbjct 482 C-GCCG--CGCTCGCCG--AGGCCCTCGGCCTGGGCGGGCCGGAGGACGTCG---TCCGC 533 Query 52704 GGCGA-ACGTGTCAACGCGCACCACAACTACACGGTGCAGGAATGCGTCGACG---GTGA 52759 | || ||| || | |||||||||||||| | | || | | ||| |||| Sbjct 534 GAGGAGACG-ATCGGCTGCCACCACAACTACACCGCCCGCGAGACCCACTACGGGCGTGA 592 Query 52760 GCTGGTGTGGGTGACCCGCAAGGGTGCCATCAGCGCGAAGCTCGGCGAGCGTGGCCTGAT 52819 ||||||| || ||||||| || ||||||||||| ||||||| ||||| | Sbjct 593 ---GGTGTGGCTGTCCCGCAA-GGCGCCATCAGCGCCCGCGAGGGCGAGCTCGGCCTCGT 648 Query 52820 CCCGGGAAGCATGGGCACCGCATCCTATGTCGTC 52853 ||||| |||||| ||| ||||| |||||| Sbjct 649 GCCGGGGTCGATGGGCGACGCGTCCTACGTCGTC 682 >seq59741 Length=555 Score = 82.4 bits (90), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 4/71 (6%) Strand=Plus/Plus Query 595 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAG----TCCT 650 ||||||||||||||||||| ||||||||||||||| |||||| |||||||| |||| Sbjct 184 TAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGCGGTTGTGGGTTCGAGTCCCTCCT 243 Query 651 GCTCTGCGGGC 661 || ||||| || Sbjct 244 GCCCTGCGAGC 254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201126496821600