Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_023735.1 Length=76797 Score E Sequences producing significant alignments: (Bits) Value seq100385 196 2e-45 >seq100385 Length=621 Score = 196 bits (216), Expect = 2e-45 Identities = 380/550 (69%), Gaps = 27/550 (5%) Strand=Plus/Minus Query 13316 GCTGAGAAAGCGCCTGCATCTCG-AAACGATATCTTGGCTAAGCGATTCGGAATCCCTAT 13374 || ||||| || || || | || ||||||||| |||||||||| ||||| || || || Sbjct 606 GCAGAGAAGGCTCCGGCCGCACGCAAACGATATTCTGGCTAAGCGTTTCGGCATTCCGAT 547 Query 13375 GGAGGGG-TACACCTACTTCTTCACTTATGAAGAGACGATTCCTCAT----CGTCGTCAA 13429 ||||||| ||||| |||| |||||| || || |||||| | || || || | || Sbjct 546 GGAGGGGGTACACATACTACTTCACGTACGACGAGACGCTACCGCAGAAAGCGGCTGCAG 487 Query 13430 AGCTTCTGGCGTCA-GCCTTGTGCTCTCGGCGCTGACCTTTCGCAGGGCGATGATTTCTG 13488 | |||| | | | ||| || || || || || ||| | |||||||| || || ||||| Sbjct 486 AACTTC-GACAAGATGCCGTGCGCGCTTGGTGCAGACTTGTCGCAGGGGGACGACTTCTG 428 Query 13489 TGCGTTCACGTTCTTCTTCCCTCT-----------TCGA--AACGGGAAG--TTCGGAAT 13533 |||||||| ||| | ||||| || || | | || ||| | ||| || Sbjct 427 CGCGTTCACCTTCCTGTTCCCGCTCGACTCAGTGATCCAGCATCGAGAACGCTACGGCAT 368 Query 13534 CAAGACTCGCAGCTACATCACCGAACTAACGTTGATGAAGTTGCCTGGCGCACTCCGACA 13593 ||| ||||| ||||| || ||||| ||| || | |||||| |||||||||| || Sbjct 367 CAAAACTCGAAGCTATATTACCGAGCTA-CGCTCATGAAGCTGCCTGGCGCCGCTCGCGC 309 Query 13594 CAAGTACGACGAATTCGTTGCCGAAGGCAGCTTGCACGTAATGCCCGGCACCATCTTGGA 13653 |||||| | || ||| | |||||| || | | || |||| | | |||| Sbjct 308 CAAGTATCAAGAGTTCATCAACGAAGGTAGTCTCATTATCCTGGACGGCGCTACGCTGGA 249 Query 13654 GATGATGGACGTCTACGACGATCTGGATAATCACATCCAAGACTGCGAGTACGACGTTCG 13713 ||||||| ||||||||||| || || | | | ||| | || |||||||| | Sbjct 248 CATGATGGTGGTCTACGACGACCTTGAGAGT-ATATCGATCACCATCAGTACGACACCCT 190 Query 13714 AGCTTTCGGATTCGACCCGTACAACGCTAAAGAGTTCGTTGCTCGCTGGGAAGCT-GAGA 13772 || | || | ||||| |||||||| ||||| || || || || ||||| ||| |||| Sbjct 189 GGCGCTTGGGTATGACCCTTACAACGCCAAAGAATTTGTCGCACGGTGGGA-GCTCGAGA 131 Query 13773 ACGGACCGTTTGGTATCGAGAAGGTCATTCAGGGTTCCAAGACCGAATCGGTTCCTCTGG 13832 ||||||| | || ||||||||||| ||||||||| || ||||| ||||| ||| Sbjct 130 ACGGACCCTACGGAATCGAGAAGGTTATTCAGGGTGTGCGCACTGAATCCGTTCCGTTGG 71 Query 13833 GTGAGCTCAA 13842 | || ||||| Sbjct 70 GCGAACTCAA 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 245235538871400