Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_023737.1 Length=155586 Score E Sequences producing significant alignments: (Bits) Value seq8276 91.5 1e-13 seq54514 86.0 6e-12 >seq8276 Length=3740 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 115021 CGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 115080 |||||| ||||| ||||| | | ||||| |||||| ||||||| | |||||| Sbjct 804 CGGCCCCGGCCGGGGCTCGGGTGCCGGCTCCCTGGTCGCCTACGTACTCAAGATCACCGA 745 Query 115081 GATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGCCCCGA 115140 |||| ||| | || |||||| |||||||||||||| ||||||| || || | Sbjct 744 CCTCGATCCGCTGGCCTATGACCTGCTGTTCGAGCGCTTCCTCAACCCCGAACGGATCTC 685 Query 115141 CTTCCCCGACATCGACGTCGACTTC 115165 | | |||||| |||||||||||||| Sbjct 684 CATGCCCGACTTCGACGTCGACTTC 660 >seq54514 Length=408 Score = 86.0 bits (94), Expect = 6e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 91912 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGTTGTCGCAGGTTCGAA 91971 |||||||||| ||||| ||| |||||||| ||| ||||| || |||||||||||||| Sbjct 292 CGGGGTGTAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGCAGGTTCGAA 351 Query 91972 TCCTGTCACCCCGAC 91986 ||||||| ||||||| Sbjct 352 TCCTGTCTCCCCGAC 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496936494248000